RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 HPDP32754 393 aaPredicted RBP20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 CD96P40200 585 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 SERPINB8P50452 374 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 TAS2R50P59544 299 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 E2F2Q14209 437 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 INAQ16352 499 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 TEX9Q8N6V9 391 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 FAM47BQ8NA70 645 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 ARMC2Q8NEN0 867 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 NFAM1Q8NET5 270 aaPredicted RBP20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 GPR78Q96P69 363 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 SIGLEC12Q96PQ1 595 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 SERINC2Q96SA4 455 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 TSPYL1Q9H0U9 437 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 CDCP1Q9H5V8 836 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 PRDM7Q9NQW5 492 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 MMACHCQ9Y4U1 282 aa20.09■□□□□ 0.81
PPP4R1-228ENST00000584074 LRRC14BA6NHZ5 514 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 TGFBR3LH3BV60 316 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 PCNAP12004 261 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 EPB42P16452 691 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 MTTPP55157 894 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 RAB38P57729 211 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 ACAP2Q15057 778 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 PFKFB4Q16877 469 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 GLE1Q53GS7 698 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 ZNF766Q5HY98 468 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 UBE3DQ7Z6J8 389 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 SCUBE1Q8IWY4 988 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 LAS2Q8IYD9 372 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 ZNF473Q8WTR7 871 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 SLC44A1Q8WWI5 657 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 UTP23Q9BRU9 249 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 MS4A8Q9BY19 250 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 VPS11Q9H270 941 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 COPS7BQ9H9Q2 264 aaPredicted RBP20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 PRTFDC1Q9NRG1 225 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 ABI3Q9P2A4 366 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 OSGIN2Q9Y236 505 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 SLC5A6Q9Y289 635 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 CLDN16Q9Y5I7 305 aa20.08■□□□□ 0.81
PPP4R1-228ENST00000584074 GABRR3A8MPY1 467 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 CYR61O00622 381 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 SH3BGRLO75368 114 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 RASAL1O95294 804 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 DDAH2O95865 285 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 INHBAP08476 426 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 MYBL2P10244 700 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 GFAPP14136 432 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 PPP2R1BP30154 601 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 TDGF1P3P51864 188 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 LIM2P55344 173 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 PMP22Q01453 160 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 PCDH1Q08174 1060 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 TGM3Q08188 693 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 SLC13A2Q13183 592 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 NAA30Q147X3 362 aaPredicted RBP20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 SETDB1Q15047 1291 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 MED27Q6P2C8 311 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 KLC3Q6P597 504 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 RPS19BP1Q86WX3 136 aaKnown RBP20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 PLD6Q8N2A8 252 aaKnown RBP20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 MDS2Q8NDY4 140 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 OR7G3Q8NG95 312 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 NR4A3Q92570 626 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 UBE2E3Q969T4 207 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 KCNC2Q96PR1 638 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 CSF3RQ99062 836 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 HES7Q9BYE0 225 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 PRM3Q9NNZ6 103 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 DAPP1Q9UN19 280 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 SCN2AQ99250 2005 aa20.07■□□□□ 0.8
PPP4R1-228ENST00000584074 CCDC189A1A4V9 331 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 WIPF3A6NGB9 483 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 RTCAO00442 366 aaKnown RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 CLDN4O14493 209 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 MYO1DO94832 1006 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 LDLRP01130 860 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 TGFB1P01137 390 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 TUBB4AP04350 444 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 ALDH18A1P54886 795 aaKnown RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 HSD17B7P56937 341 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 OC90Q02509 493 aaPredicted RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 OR1C1Q15619 314 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 ZNF468Q5VIY5 522 aaPredicted RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 HIST2H2BCQ6DN03 193 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 SPINK14Q6IE38 97 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 ZNF793Q6ZN11 406 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 CLNKQ7Z7G1 428 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 LGI4Q8N135 537 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 RNF175Q8N4F7 328 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 UHMK1Q8TAS1 419 aaKnown RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 ADAMTS18Q8TE60 1221 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 C5orf34Q96MH7 638 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 PAFAH2Q99487 392 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 KLHL1Q9NR64 748 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 PNO1Q9NRX1 252 aaKnown RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 ZNF358Q9NW07 568 aa20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 CPSF2Q9P2I0 782 aaKnown RBP20.06■□□□□ 0.8
PPP4R1-228ENST00000584074 PLEKHB1Q9UF11 243 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms