RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NDOR1Q9UHB4 597 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 BAIAP2L1Q9UHR4 511 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 MCM8Q9UJA3 840 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SRPK3Q9UPE1 567 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TMED5Q9Y3A6 229 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ASB4Q9Y574 426 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 PCDHGA8Q9Y5G5 932 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 PCDHGA3Q9Y5H0 932 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 MAU2Q9Y6X3 613 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 WDFY3Q8IZQ1 3526 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 A0A088AWK7 358 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 A0A1B0GX78 115 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 GNG14A0A1W2PPG7 69 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 H0YIG0 161 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 CHST10O43529 356 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 B3GALT2O43825 422 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 CPNE3O75131 537 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 MYO1DO94832 1006 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 NSA2O95478 260 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 HBQ1P09105 142 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 FAM58BPP0C7Q3 252 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 G6PDP11413 515 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 ACPPP15309 386 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 TSFMP43897 325 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 AVPR1BP47901 424 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 MAPK12P53778 367 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 HNRNPH2P55795 449 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 GABREP78334 506 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 FOXC1Q12948 553 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 CAMK2BQ13554 666 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 LCN10Q6JVE6 187 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 PRMT9Q6P2P2 845 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 NUDT13Q86X67 352 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 LIX1Q8N485 282 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.02□□□□□ -0.97
RFFL-210ENST00000582308 BCAS4Q8TDM0 211 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 TM4SF18Q96CE8 201 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 CLIP3Q96DZ5 547 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 MVB12AQ96EY5 273 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 MMABQ96EY8 250 aaPredicted RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 EGLN2Q96KS0 407 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 SLC46A1Q96NT5 459 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 MAPKAP1Q9BPZ7 522 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 ZPBPQ9BS86 351 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 NPLQ9BXD5 320 aaPredicted RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 ULBP3Q9BZM4 244 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 SLC7A5P2Q9GIP4 190 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 ROGDIQ9GZN7 287 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 AKIRIN1Q9H9L7 192 aaPredicted RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 COPS7BQ9H9Q2 264 aaPredicted RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 SLC22A11Q9NSA0 550 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 AIG1Q9NVV5 245 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 FOXJ2Q9P0K8 574 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 G3BP2Q9UN86 482 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 CDC14AQ9UNH5 594 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 WASF3Q9UPY6 502 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 EIF3LQ9Y262 564 aaKnown RBP9.02□□□□□ -0.97
RFFL-210ENST00000582308 ATG4BQ9Y4P1 393 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 GPR45Q9Y5Y3 372 aa9.02□□□□□ -0.97
RFFL-210ENST00000582308 TEX51A0A1B0GUA7 166 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 A0A1W2PR48 441 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 CDRT15L2A8MXV6 281 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 FAM227AF5H4B4 570 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 MEN1O00255 615 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 CYR61O00622 381 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 NDUFAB1O14561 156 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 ANKRD28O15084 1053 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 UBDO15205 165 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 NVLO15381 856 aaKnown RBP9.01□□□□□ -0.97
RFFL-210ENST00000582308 PROM1O43490 865 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 STK17BO94768 372 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 DLGAP3O95886 979 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 ONECUT2O95948 504 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 PRPS2P11908 318 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 NCF2P19878 526 aaPredicted RBP9.01□□□□□ -0.97
RFFL-210ENST00000582308 MAPK1P28482 360 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 HOXD11P31277 338 aaPredicted RBP9.01□□□□□ -0.97
RFFL-210ENST00000582308 ID4P47928 161 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 LIM2P55344 173 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 TAS2R50P59544 299 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 SKP1P63208 163 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 MAT1AQ00266 395 aaKnown RBP9.01□□□□□ -0.97
RFFL-210ENST00000582308 MC1RQ01726 317 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 ZNF763Q0D2J5 394 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 MAD2L1Q13257 205 aaPredicted RBP9.01□□□□□ -0.97
RFFL-210ENST00000582308 DSG2Q14126 1118 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 PTGR1Q14914 329 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 SLC9A5Q14940 896 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 SYT16Q17RD7 645 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 NKAIN1Q4KMZ8 207 aa9.01□□□□□ -0.97
RFFL-210ENST00000582308 TMEM164Q5U3C3 297 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms