RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 SH3D21A4FU49 640 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 KDM4EB2RXH2 506 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 IL18BPO95998 194 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 IL2RAP01589 272 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 FPR1P21462 350 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 DNASE1L1P49184 302 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 WNT3P56703 355 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 DMTNQ08495 405 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 HYAL2Q12891 473 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 PWP1Q13610 501 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ZNF750Q32MQ0 723 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 KIAA0930Q6ICG6 404 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 FAM47EQ6ZV65 393 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 REXO1L1PQ8IX06 675 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ASB11Q8WXH4 323 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 LPGAT1Q92604 370 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 CCL19Q99731 98 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 PCBD2Q9H0N5 130 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ADGRE2Q9UHX3 823 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 SH2B3Q9UQQ2 575 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ATG4BQ9Y4P1 393 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 MMACHCQ9Y4U1 282 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 ROS1P08922 2347 aa12.77□□□□□ -0.37
CSNK1D-219ENST00000581660 DSCAMO60469 2012 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.374e-12■■□□□ 12.2
CSNK1D-219ENST00000581660 GFYI3L273 518 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 CEP104O60308 925 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 ESR1P03372 595 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 RNH1P13489 461 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 PAX1P15863 534 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 OPRM1P35372 400 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 TBPL1P62380 186 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 SIX1Q15475 284 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 ACKR1Q16570 336 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 BBS9Q3SYG4 887 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 C11orf63Q6NUN7 778 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 C20orf204Q6ZNR8 217 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 HIPK1Q86Z02 1210 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 NEIL3Q8TAT5 605 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 TREX1Q9NSU2 369 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 GALPQ9UBC7 116 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 CLDN16Q9Y5I7 305 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
CSNK1D-219ENST00000581660 EEF1E1-BLOC1S5C9J1V9 151 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 NDUFS4O43181 175 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 EEF1E1O43324 174 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 B3GALT4O96024 378 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 CCL3P10147 92 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 CHRM3P20309 590 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 CTSSP25774 331 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 FMO4P31512 558 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 CTNNA1P35221 906 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 GRK3P35626 688 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 GRIA1P42261 906 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 PTH2RP49190 550 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 GDF10P55107 478 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 CAPRIN1Q14444 709 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 HECTD2Q5U5R9 776 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 STRA8Q7Z7C7 330 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 PPHLN1Q8NEY8 458 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 ALG3Q92685 438 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 FAM136AQ96C01 138 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 TRIM5Q9C035 493 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 SLC6A15Q9H2J7 730 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 SH2D2AQ9NP31 389 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 REXO2Q9Y3B8 237 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
CSNK1D-219ENST00000581660 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 CD8B2A6NJW9 211 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 PSMD12O00232 456 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 WWP2O00308 870 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 AVILO75366 819 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 SOX30O94993 753 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 TJP3O95049 919 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 SYF2O95926 243 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 P04436 131 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 RFPL3SP0C7P2 107 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 ZNF888P0CJ79 500 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 CLCN7P51798 805 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 HK2P52789 917 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms