RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NKAPQ8N5F7 415 aaKnown RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 TMEM156Q8N614 296 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TTLQ8NG68 377 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 VMP1Q96GC9 406 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 SEC16BQ96JE7 1060 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 FAR2Q96K12 515 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 DDX47Q9H0S4 455 aaKnown RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 ZNF223Q9UK11 482 aaPredicted RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 YARS2Q9Y2Z4 477 aaKnown RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 TEX264Q9Y6I9 313 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 DNAJC13O75165 2243 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 FANCGO15287 622 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 ZFAND5O76080 213 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 IGFBP2P18065 325 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 MORF4L2Q15014 288 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 TOR1AIP1Q5JTV8 583 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 HP1BP3Q5SSJ5 553 aaPredicted RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 ARHGAP11AQ6P4F7 1023 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 TMIGD1Q6UXZ0 262 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 MEX3BQ6ZN04 569 aaKnown RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 ZC3HC1Q86WB0 502 aaKnown RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 GPALPP1Q8IXQ4 340 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 KLHDC8AQ8IYD2 350 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 MARVELD2Q8N4S9 558 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 LILRB4Q8NHJ6 448 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 ASB5Q8WWX0 329 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 GAL3ST3Q96A11 431 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 RHBDF1Q96CC6 855 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 MS4A6EQ96DS6 147 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 PDLIM2Q96JY6 352 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 WDR83Q9BRX9 315 aaKnown RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 TMUB1Q9BVT8 246 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 CAPS2Q9BXY5 557 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 PITHD1Q9GZP4 211 aaPredicted RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 NT5DC2Q9H857 520 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 PRTFDC1Q9NRG1 225 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 PNO1Q9NRX1 252 aaKnown RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 MOCS1Q9NZB8 636 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 FBXW2Q9UKT8 454 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 SNX12Q9UMY4 172 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 OARD1Q9Y530 152 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 PSAT1Q9Y617 370 aa9.87□□□□□ -0.83
RFFL-209ENST00000581265 INTS1Q8N201 2190 aaKnown RBP9.87□□□□□ -0.83
RFFL-209ENST00000581265 A0A088AWK7 358 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SYNDIG1LA6NDD5 238 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TMEM200CA6NKL6 621 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TGFBR3LH3BV60 316 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CYR61O00622 381 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 ERI3O43414 337 aaKnown RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 B3GALT2O43825 422 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CLEC3AO75596 197 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TBX6O95947 436 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 TUBB4AP04350 444 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TPOP07202 933 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 ZNF10P21506 573 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 HNRNPH1P31943 449 aaKnown RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 HPDP32754 393 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 RFC3P40938 356 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 GDF5P43026 501 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SLC6A12P48065 614 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SSR4P51571 173 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 HNRNPFP52597 415 aaKnown RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 RAB38P57729 211 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TAS2R39P59534 338 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 MGAT5Q09328 741 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SLC13A2Q13183 592 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 ADPRMQ3LIE5 342 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 XKR6Q5GH73 641 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 EMC4Q5J8M3 183 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 PAOXQ6QHF9 649 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CEP128Q6ZU80 1094 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SYDE1Q6ZW31 735 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 ADAMTSL2Q86TH1 951 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CD163Q86VB7 1156 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFFL-209ENST00000581265 ZNF595Q8IYB9 648 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 SLC35F6Q8N357 371 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 PSD4Q8NDX1 1056 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CHDHQ8NE62 594 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 OR2L5Q8NG80 312 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 OR52N2Q8NGI0 321 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 ANKRD49Q8WVL7 239 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 NCLNQ969V3 563 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CFAP36Q96G28 342 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 PWWP2AQ96N64 755 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 QRFPRQ96P65 431 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 EGFL8Q99944 293 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 CCDC77Q9BR77 488 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 TP63Q9H3D4 680 aaPredicted RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 ADAP2Q9NPF8 381 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 DEPPQ9NTK1 212 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 KCMF1Q9P0J7 381 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 MYOTQ9UBF9 498 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 MRPS33Q9Y291 106 aaKnown RBP9.86□□□□□ -0.83
RFFL-209ENST00000581265 AKAP9Q99996 3911 aa9.86□□□□□ -0.83
RFFL-209ENST00000581265 A0A0G2JN53 185 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms