RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 PHF11Q9UIL8 331 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CDC14AQ9UNH5 594 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 MRPS2Q9Y399 296 aaKnown RBP10.19□□□□□ -0.78
SS18-213ENST00000579640 LOXL2Q9Y4K0 774 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 SPACA6W5XKT8 324 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
SS18-213ENST00000579640 CCDC187A0A096LP49 1063 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 DYTNA2CJ06 578 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 DSCR3O14972 297 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 POLR1CO15160 346 aaPredicted RBP10.18□□□□□ -0.78
SS18-213ENST00000579640 TMPRSS11DO60235 418 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 FAM58BPP0C7Q3 252 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 IL1RNP18510 177 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 TACR1P25103 407 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PIK3R1P27986 724 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PRDX6P30041 224 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 HPCAL1P37235 193 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 RAB15P59190 212 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 SLAMF1Q13291 335 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 KRT72Q14CN4 511 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 HEPACAMQ14CZ8 416 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 DPY19L1Q2PZI1 675 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PRMT9Q6P2P2 845 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PAOXQ6QHF9 649 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 C6orf89Q6UWU4 347 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 DGLUCYQ7Z3D6 616 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 R3HCC1LQ7Z5L2 792 aaKnown RBP10.18□□□□□ -0.78
SS18-213ENST00000579640 TMPRSS12Q86WS5 348 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PROKR1Q8TCW9 393 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 ADAMTS18Q8TE60 1221 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 TSPEARQ8WU66 669 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 MTERF3Q96E29 417 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 TUBB6Q9BUF5 446 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 FAIM2Q9BWQ8 316 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 SLC7A5P2Q9GIP4 190 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 ACTL8Q9H568 366 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 ARMCX1Q9P291 453 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 BAIAP2L1Q9UHR4 511 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 NAALAD2Q9Y3Q0 740 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
SS18-213ENST00000579640 ZNF292O60281 2723 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 FAM234BA2RU67 622 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CAPN14A8MX76 684 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 ZNF749O43361 778 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 FOXS1O43638 330 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 GBAP04062 536 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 DRD2P14416 443 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TAS2R50P59544 299 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 UFM1P61960 85 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 KLC1Q07866 573 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 AGKQ53H12 422 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 FAM71E1Q6IPT2 247 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 RHBDD2Q6NTF9 364 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CEACAM20Q6UY09 585 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TTLL10Q6ZVT0 673 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 RAB11FIP2Q7L804 512 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 GPR180Q86V85 440 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 PDSS2Q86YH6 399 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TMEM126BQ8IUX1 230 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 RIMKLAQ8IXN7 391 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 AMER3Q8N944 861 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CLHC1Q8NHS4 586 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CDC26Q8NHZ8 85 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TESCQ96BS2 214 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TM4SF18Q96CE8 201 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CMTM5Q96DZ9 223 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 ZNF764Q96H86 408 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 PRPF18Q99633 342 aaKnown RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 ZPBPQ9BS86 351 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 RTKNQ9BST9 563 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CLMPQ9H6B4 373 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 REEP4Q9H6H4 257 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 ACTR5Q9H9F9 607 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 TXLNGQ9NUQ3 528 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CCDC167Q9P0B6 97 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 DAPP1Q9UN19 280 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 ASB4Q9Y574 426 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 A0A0A6YYC8 382 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 A0A1B0GX78 115 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 BLACEA4D250 179 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 I3L1I5 382 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 TBX19O60806 448 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 SCRG1O75711 98 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 KCNK5O95279 499 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 IL3P08700 152 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 DDCP20711 480 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 TLX1P31314 330 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 BUD31P41223 144 aaPredicted RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 POLR2JP52435 117 aaKnown RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 LIM2P55344 173 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 NME5P56597 212 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 KCNK10P57789 538 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 SRSF11Q05519 484 aaKnown RBP10.17□□□□□ -0.78
SS18-213ENST00000579640 C2orf80Q0P641 193 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 PRSS41Q7RTY9 318 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 CA13Q8N1Q1 262 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
SS18-213ENST00000579640 OR9I1Q8NGQ6 314 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms