RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CCDC189A1A4V9 331 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 NME2P1O60361 137 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 SLC25A12O75746 678 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 NME2P22392 152 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 TPP2P29144 1249 aaPredicted RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 CRABP2P29373 138 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 TRHRP34981 398 aaPredicted RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 CASP2P42575 452 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 MAGEA4P43358 317 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 CYB561P49447 251 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 HLCSP50747 726 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 CLCN2P51788 898 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 MTTPP55157 894 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 ALDH6A1Q02252 535 aaKnown RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 RUNX2Q13950 521 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 DOC2AQ14183 400 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 E2F2Q14209 437 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 HIST2H2ACQ16777 129 aaPredicted RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 KBTBD12Q3ZCT8 623 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 XKR6Q5GH73 641 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 HIST2H2AA3Q6FI13 130 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 SPINK14Q6IE38 97 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 SLC25A25Q6KCM7 469 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 RPTNQ6XPR3 784 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 LRRC70Q7Z2Q7 622 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 GALNTL5Q7Z4T8 443 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 VN1R5Q7Z5H4 357 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 CCDC91Q7Z6B0 441 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 ZNF595Q8IYB9 648 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 PPM1NQ8N819 430 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 APCDD1LQ8NCL9 501 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 SRFBP1Q8NEF9 429 aaKnown RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 B3GNT7Q8NFL0 401 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 STAG3L4Q8TBR4 150 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 UBTD2Q8WUN7 234 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 UBE2E3Q969T4 207 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 TMEM125Q96AQ2 219 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 MAGED4Q96JG8 741 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 GPR137Q96N19 417 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 FRMD6Q96NE9 622 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 HES7Q9BYE0 225 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 ROGDIQ9GZN7 287 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 COPS7BQ9H9Q2 264 aaPredicted RBP10.79□□□□□ -0.68
SSH2-208ENST00000579040 NMRAL1Q9HBL8 299 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 ADAP2Q9NPF8 381 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 PRTFDC1Q9NRG1 225 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 NUDT4Q9NZJ9 180 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 ENTPD4Q9Y227 616 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
SSH2-208ENST00000579040 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 A0A0G2JN53 185 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 CCL21O00585 134 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 CCNT2O60583 730 aaKnown RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 SLC19A2O60779 497 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 PRAMEF4O60810 478 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 MYO1DO94832 1006 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 TBX6O95947 436 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 LTA4HP09960 611 aaKnown RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 SLC35E2BP0CK96 405 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 TFEBP19484 476 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 CD22P20273 847 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 SERPINB1P30740 379 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 KCNC1P48547 511 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 PLA2G16P53816 162 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 IRF8Q02556 426 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 PCDH1Q08174 1060 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 SLC13A2Q13183 592 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 ART3Q13508 389 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 SLMAPQ14BN4 828 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.68
SSH2-208ENST00000579040 PRAMEF9Q5VWM5 478 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 ABHD17CQ6PCB6 329 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 ZDHHC24Q6UX98 284 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 SYT10Q6XYQ8 523 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 Q6ZPB1 254 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 TBC1D1Q86TI0 1168 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 ZNF808Q8N4W9 903 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 POGLUT1Q8NBL1 392 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 FBF1Q8TES7 1133 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 VMP1Q96GC9 406 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 KCNC2Q96PR1 638 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 LYRM4Q9HD34 91 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 ZNF490Q9ULM2 529 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 DAPP1Q9UN19 280 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 CLDN16Q9Y5I7 305 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 KLF2Q9Y5W3 355 aaPredicted RBP10.78□□□□□ -0.68
SSH2-208ENST00000579040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.78□□□□□ -0.683e-7■■□□□ 14.1
SSH2-208ENST00000579040 DNAJC13O75165 2243 aa10.78□□□□□ -0.68
SSH2-208ENST00000579040 EML6Q6ZMW3 1958 aa10.77□□□□□ -0.68
SSH2-208ENST00000579040 TRBV11-1A0A0K0K1C0 115 aa10.77□□□□□ -0.69
SSH2-208ENST00000579040 A8MUA0 341 aa10.77□□□□□ -0.69
SSH2-208ENST00000579040 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.69
SSH2-208ENST00000579040 CYR61O00622 381 aa10.77□□□□□ -0.69
SSH2-208ENST00000579040 HNRNPRO43390 633 aaKnown RBP10.77□□□□□ -0.69
SSH2-208ENST00000579040 KERAO60938 352 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms