RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 THAP3Q8WTV1 239 aaPredicted RBP16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 MARVELD3Q96A59 401 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 CCDC120Q96HB5 630 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 GPR22Q99680 433 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 MCMBPQ9BTE3 642 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 EFCAB11Q9BUY7 163 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 CENPEQ02224 2701 aa16.4■□□□□ 0.22
SLC9A3R1-203ENST00000578958 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ASPDHA6ND91 283 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SYNDIG1LA6NDD5 238 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 FAM159BA6NKW6 160 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 C4orf51C9J302 202 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TAPBPO15533 448 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 IFNA16P05015 189 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ABOP16442 354 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ZNF24P17028 368 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 HNRNPH1P31943 449 aaKnown RBP16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 GGT5P36269 586 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 HLCSP50747 726 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 MTTPP55157 894 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 HSD17B7P56937 341 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 IRF8Q02556 426 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 RUNX2Q13950 521 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 OR4D1Q15615 310 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CYS1Q717R9 158 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TBC1D1Q86TI0 1168 aaPredicted RBP16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ZNF595Q8IYB9 648 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ZNF808Q8N4W9 903 aaPredicted RBP16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 FAM47BQ8NA70 645 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 STAG3L4Q8TBR4 150 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KIAA1191Q96A73 305 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ESAMQ96AP7 390 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 VMP1Q96GC9 406 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 FRMD6Q96NE9 622 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TMEM79Q9BSE2 394 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 EHD1Q9H4M9 534 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SPACA6W5XKT8 324 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CRYBG3Q68DQ2 2970 aa16.39■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KLRC4-KLRK1H3BQV0 150 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ASNA1O43681 348 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NME2P1O60361 137 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NME2P22392 152 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 STX2P32856 288 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SMSP52788 366 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 BMPR2Q13873 1038 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 DOC2AQ14183 400 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TERF2Q15554 542 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ZNF468Q5VIY5 522 aaPredicted RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CLNKQ7Z7G1 428 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 GHDCQ8N2G8 530 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SRFBP1Q8NEF9 429 aaKnown RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NFAM1Q8NET5 270 aaPredicted RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ITLN2Q8WWU7 325 aaPredicted RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 UBE2E3Q969T4 207 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ROGDIQ9GZN7 287 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ALG9Q9H6U8 611 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 GRHL1Q9NZI5 618 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TINAGQ9UJW2 476 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KLF13Q9Y2Y9 288 aaPredicted RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KLF2Q9Y5W3 355 aaPredicted RBP16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CLCA3PQ9Y6N3 262 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CACNA1DQ01668 2161 aa16.38■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CELSR2Q9HCU4 2923 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SUPT3HB4E1H0 165 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 SUPT3HO75486 399 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ZFAND5O76080 213 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 PCNAP12004 261 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CERS1P27544 350 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CRABP2P29373 138 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TRHRP34981 398 aaPredicted RBP16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 MSH2P43246 934 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 MAGEA4P43358 317 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KCNC1P48547 511 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 STX4Q12846 297 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CHIT1Q13231 466 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 EFTUD2Q15029 972 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■□□ 15.6
SLC9A3R1-203ENST00000578958 C3AR1Q16581 482 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KBTBD12Q3ZCT8 623 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ABHD17CQ6PCB6 329 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 LRRC70Q7Z2Q7 622 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CYP4Z2PQ8N1L4 340 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 TMEM132CQ8N3T6 1108 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CPSF7Q8N684 471 aaKnown RBP16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 PDPRQ8NCN5 879 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NCLNQ969V3 563 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 KCNC2Q96PR1 638 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CD244Q9BZW8 370 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NMRAL1Q9HBL8 299 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 CHST11Q9NPF2 352 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ADAP2Q9NPF8 381 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 NUDT4Q9NZJ9 180 aa16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
SLC9A3R1-203ENST00000578958 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms