RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PRM3Q9NNZ6 103 aa15.08■□□□□ 0
VAPA-204ENST00000577901 RIC8BQ9NVN3 520 aa15.08■□□□□ 0
VAPA-204ENST00000577901 ZNF358Q9NW07 568 aa15.08■□□□□ 0
VAPA-204ENST00000577901 PSMC3IPQ9P2W1 217 aaPredicted RBP15.08■□□□□ 0
VAPA-204ENST00000577901 SUCOQ9UBS9 1254 aaKnown RBP15.08■□□□□ 0
VAPA-204ENST00000577901 TEP1Q99973 2627 aaKnown RBP15.08■□□□□ 0
VAPA-204ENST00000577901 AKAP9Q99996 3911 aa15.08■□□□□ 0
VAPA-204ENST00000577901 TRGV8A0A0C4DH27 118 aa15.07■□□□□ 0
VAPA-204ENST00000577901 SMIM24O75264 130 aa15.07■□□□□ 0
VAPA-204ENST00000577901 CLEC3AO75596 197 aa15.07■□□□□ 0
VAPA-204ENST00000577901 UNC5CO95185 931 aa15.07■□□□□ 0
VAPA-204ENST00000577901 ZNF888P0CJ79 500 aaPredicted RBP15.07■□□□□ 0
VAPA-204ENST00000577901 IL10P22301 178 aa15.07■□□□□ 0
VAPA-204ENST00000577901 HNF4AP41235 474 aa15.07■□□□□ 0
VAPA-204ENST00000577901 CASP2P42575 452 aa15.07■□□□□ 0
VAPA-204ENST00000577901 PIK3CGP48736 1102 aa15.07■□□□□ 0
VAPA-204ENST00000577901 PCBP2Q15366 365 aaKnown RBP eCLIP15.07■□□□□ 0
VAPA-204ENST00000577901 DEFB134Q4QY38 66 aa15.07■□□□□ 0
VAPA-204ENST00000577901 RIPOR1Q6ZS17 1223 aa15.07■□□□□ 0
VAPA-204ENST00000577901 PRSS41Q7RTY9 318 aa15.07■□□□□ 0
VAPA-204ENST00000577901 LCA5Q86VQ0 697 aa15.07■□□□□ 0
VAPA-204ENST00000577901 PDSS2Q86YH6 399 aa15.07■□□□□ 0
VAPA-204ENST00000577901 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.07■□□□□ 03e-9■■■■■ 57.3
VAPA-204ENST00000577901 TEX9Q8N6V9 391 aa15.07■□□□□ 0
VAPA-204ENST00000577901 UTP15Q8TED0 518 aaKnown RBP15.07■□□□□ 0
VAPA-204ENST00000577901 CREB3L4Q8TEY5 395 aa15.07■□□□□ 0
VAPA-204ENST00000577901 CCT6BQ92526 530 aa15.07■□□□□ 0
VAPA-204ENST00000577901 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
VAPA-204ENST00000577901 MRPL57Q9BQC6 102 aaKnown RBP15.07■□□□□ 0
VAPA-204ENST00000577901 ZNF700Q9H0M5 742 aa15.07■□□□□ 0
VAPA-204ENST00000577901 CLK4Q9HAZ1 481 aaKnown RBP15.07■□□□□ 0
VAPA-204ENST00000577901 HCN3Q9P1Z3 774 aa15.07■□□□□ 0
VAPA-204ENST00000577901 ABI3Q9P2A4 366 aa15.07■□□□□ 0
VAPA-204ENST00000577901 MKL2Q9ULH7 1088 aa15.07■□□□□ 0
VAPA-204ENST00000577901 ASB1Q9Y576 335 aa15.07■□□□□ 0
VAPA-204ENST00000577901 KLF2Q9Y5W3 355 aaPredicted RBP15.07■□□□□ 0
VAPA-204ENST00000577901 DIDO1Q9BTC0 2240 aaKnown RBP15.07■□□□□ 0
VAPA-204ENST00000577901 LOC102723996A0A087X1L8 192 aa15.06■□□□□ 0
VAPA-204ENST00000577901 GALR3O60755 368 aaPredicted RBP15.06■□□□□ 0
VAPA-204ENST00000577901 RDH16O75452 317 aa15.06■□□□□ 0
VAPA-204ENST00000577901 RASAL1O95294 804 aa15.06■□□□□ 0
VAPA-204ENST00000577901 WDPCPO95876 746 aa15.06■□□□□ 0
VAPA-204ENST00000577901 CRYABP02511 175 aaKnown RBP15.06■□□□□ 0
VAPA-204ENST00000577901 ITGAMP11215 1152 aa15.06■□□□□ 0
VAPA-204ENST00000577901 EPORP19235 508 aa15.06■□□□□ 0
VAPA-204ENST00000577901 MST1P26927 711 aa15.06■□□□□ 0
VAPA-204ENST00000577901 XCR1P46094 333 aa15.06■□□□□ 0
VAPA-204ENST00000577901 SNRPNP63162 240 aaKnown RBP15.06■□□□□ 0
VAPA-204ENST00000577901 PCDH1Q08174 1060 aa15.06■□□□□ 0
VAPA-204ENST00000577901 TOR1AIP1Q5JTV8 583 aa15.06■□□□□ 0
VAPA-204ENST00000577901 MFSD4BQ5TF39 518 aa15.06■□□□□ 0
VAPA-204ENST00000577901 ZC3H7AQ8IWR0 971 aaKnown RBP15.06■□□□□ 0
VAPA-204ENST00000577901 DNAJB8Q8NHS0 232 aa15.06■□□□□ 0
VAPA-204ENST00000577901 SUN3Q8TAQ9 357 aa15.06■□□□□ 0
VAPA-204ENST00000577901 ACMSDQ8TDX5 336 aa15.06■□□□□ 0
VAPA-204ENST00000577901 METTL21AQ8WXB1 218 aa15.06■□□□□ 0
VAPA-204ENST00000577901 CCDC120Q96HB5 630 aa15.06■□□□□ 0
VAPA-204ENST00000577901 FAR2Q96K12 515 aa15.06■□□□□ 0
VAPA-204ENST00000577901 RNF32Q9H0A6 362 aa15.06■□□□□ 0
VAPA-204ENST00000577901 MRPL46Q9H2W6 279 aaKnown RBP15.06■□□□□ 0
VAPA-204ENST00000577901 RHBGQ9H310 441 aa15.06■□□□□ 0
VAPA-204ENST00000577901 XPR1Q9UBH6 696 aa15.06■□□□□ 0
VAPA-204ENST00000577901 SEC14L3Q9UDX4 400 aa15.06■□□□□ 0
VAPA-204ENST00000577901 TBK1Q9UHD2 729 aa15.06■□□□□ 0
VAPA-204ENST00000577901 ZNF490Q9ULM2 529 aaPredicted RBP15.06■□□□□ 0
VAPA-204ENST00000577901 PDZD2O15018 2839 aa15.05■□□□□ 0
VAPA-204ENST00000577901 LRIT2A6NDA9 550 aa15.05■□□□□ -0
VAPA-204ENST00000577901 CCL21O00585 134 aa15.05■□□□□ -0
VAPA-204ENST00000577901 PRAMEF4O60810 478 aa15.05■□□□□ -0
VAPA-204ENST00000577901 PRAMEF2O60811 474 aa15.05■□□□□ -0
VAPA-204ENST00000577901 CYC1P08574 325 aa15.05■□□□□ -0
VAPA-204ENST00000577901 SMIM10L1P0DMW3 83 aa15.05■□□□□ -0
VAPA-204ENST00000577901 ICAM2P13598 275 aa15.05■□□□□ -0
VAPA-204ENST00000577901 RAB8AP61006 207 aa15.05■□□□□ -0
VAPA-204ENST00000577901 VSNL1P62760 191 aa15.05■□□□□ -0
VAPA-204ENST00000577901 AP2B1P63010 937 aa15.05■□□□□ -0
VAPA-204ENST00000577901 SRSF11Q05519 484 aaKnown RBP15.05■□□□□ -0
VAPA-204ENST00000577901 HYAL2Q12891 473 aa15.05■□□□□ -0
VAPA-204ENST00000577901 PCOLCEQ15113 449 aa15.05■□□□□ -0
VAPA-204ENST00000577901 MINDY4Q4G0A6 757 aa15.05■□□□□ -0
VAPA-204ENST00000577901 ABHD17BQ5VST6 288 aa15.05■□□□□ -0
VAPA-204ENST00000577901 PRAMEF9Q5VWM5 478 aa15.05■□□□□ -0
VAPA-204ENST00000577901 LIPJQ5W064 366 aa15.05■□□□□ -0
VAPA-204ENST00000577901 WDR93Q6P2C0 686 aa15.05■□□□□ -0
VAPA-204ENST00000577901 MED27Q6P2C8 311 aa15.05■□□□□ -0
VAPA-204ENST00000577901 MTFR2Q6P444 385 aa15.05■□□□□ -0
VAPA-204ENST00000577901 TMEM205Q6UW68 189 aa15.05■□□□□ -0
VAPA-204ENST00000577901 MRGPRGQ86SM5 289 aa15.05■□□□□ -0
VAPA-204ENST00000577901 PTGR2Q8N8N7 351 aaPredicted RBP15.05■□□□□ -0
VAPA-204ENST00000577901 PHF21BQ96EK2 531 aa15.05■□□□□ -0
VAPA-204ENST00000577901 SMIM10Q96HG1 83 aa15.05■□□□□ -0
VAPA-204ENST00000577901 KLHL31Q9H511 634 aa15.05■□□□□ -0
VAPA-204ENST00000577901 A0A088AWK7 358 aa15.04■□□□□ -0
VAPA-204ENST00000577901 OR5H15A6NDH6 313 aa15.04■□□□□ -0
VAPA-204ENST00000577901 ZNF860A6NHJ4 632 aa15.04■□□□□ -0
VAPA-204ENST00000577901 STX16-NPEPL1H3BU86 382 aa15.04■□□□□ -0
VAPA-204ENST00000577901 STX16O14662 325 aa15.04■□□□□ -0
VAPA-204ENST00000577901 SHBGP04278 402 aa15.04■□□□□ -0
VAPA-204ENST00000577901 C8orf89P0DMQ9 161 aa15.04■□□□□ -0
VAPA-204ENST00000577901 ZNF10P21506 573 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms