RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PPP3R2Q96LZ3 170 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LRFN5Q96NI6 719 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 QRFPRQ96P65 431 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KCNC2Q96PR1 638 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CCT8L2Q96SF2 557 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TBCDQ9BTW9 1192 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NUF2Q9BZD4 464 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPRY4Q9C004 299 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ROGDIQ9GZN7 287 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NSRP1Q9H0G5 558 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KLHL31Q9H511 634 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AKTIPQ9H8T0 292 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FANCEQ9HB96 536 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LHX9Q9NQ69 397 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C1orf109Q9NX04 203 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OCIAD1Q9NX40 245 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AKAP7Q9P0M2 348 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DNHD1Q96M86 4753 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HYKKA2RU49 373 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 H0YIG0 161 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PLPP1O14494 284 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR2B3O76000 313 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KLHL18O94889 574 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CTSBP07858 339 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TRA2BP62995 288 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HMGCS1Q01581 520 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TGM3Q08188 693 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HERC3Q15034 1050 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GPR19Q15760 415 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NDUFA9Q16795 377 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HKDC1Q2TB90 917 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AP5B1Q2VPB7 878 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC9B1Q4ZJI4 515 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RFTN2Q52LD8 501 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR4C11Q6IEV9 310 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MRM1Q6IN84 353 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RHBDD2Q6NTF9 364 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ABHD13Q7L211 337 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RAB11FIP2Q7L804 512 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPATA19Q7Z5L4 167 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PPP1R3BQ86XI6 285 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DDIASQ8IXT1 998 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RNF175Q8N4F7 328 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KCT2Q8NC54 265 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RFWD2Q8NHY2 731 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 WDR36Q8NI36 951 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C10orf82Q8WW14 230 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C10orf90Q96M02 699 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TEFMQ96QE5 360 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR6C1Q96RD1 312 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 F2RL3Q96RI0 385 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CENPKQ9BS16 269 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DDA1Q9BW61 102 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NPLQ9BXD5 320 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPRTNQ9H040 489 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR51B5Q9H339 312 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NPHS2Q9NP85 383 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PRDM9Q9NQV7 894 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 THSD1Q9NS62 852 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MRGBPQ9NV56 204 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TMEM45AQ9NWC5 275 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MARCOQ9UEW3 520 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RARRES3Q9UL19 164 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RUVBL1Q9Y265 456 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PTGDR2Q9Y5Y4 395 aa10.56□□□□□ -0.72
CDK5RAP3-204ENST00000577664 A0A1W2PNU3 283 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EFCAB7A8K855 629 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TMEM150CB9EJG8 249 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PLD2O14939 933 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 POLR1CO15160 346 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FOXS1O43638 330 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GALR3O60755 368 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SKAP2O75563 359 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NSA2O95478 260 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HBQ1P09105 142 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CCL4P13236 92 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ALOX12P18054 663 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LBPP18428 481 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EPHA3P29320 983 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ARFIP2P53365 341 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C21orf58P58505 322 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ERVK-8P63133 956 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GABREP78334 506 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RAE1P78406 368 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PDCD2Q16342 344 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 IMPG1Q17R60 797 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MUM1Q2TAK8 710 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LSM12Q3MHD2 195 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ATP6AP1LQ52LC2 224 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SGO1Q5FBB7 561 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 VWA5B1Q5TIE3 1220 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FAM219BQ5XKK7 198 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PRMT9Q6P2P2 845 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TRIM40Q6P9F5 258 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SCIMPQ6UWF3 145 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF517Q6ZMY9 492 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PAGE2Q7Z2X7 111 aa10.55□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPATA21Q7Z572 469 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms