RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 B4GALT2O60909 372 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 SMIM10L1P0DMW3 83 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 IL10P22301 178 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 JAK1P23458 1154 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 CASP2P42575 452 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PIK3CGP48736 1102 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 SLC18A1P54219 525 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 Q0VFX4 171 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 E2F2Q14209 437 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 ABRAXAS2Q15018 415 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 NADK2Q4G0N4 442 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 SH2D5Q6ZV89 423 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 CA13Q8N1Q1 262 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 OR2L5Q8NG80 312 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 TSLPQ969D9 159 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 ATP6V1E2Q96A05 226 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 SMIM10Q96HG1 83 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 FAM111AQ96PZ2 611 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 F2RL3Q96RI0 385 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 EPN3Q9H201 632 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 NOL11Q9H8H0 719 aaKnown RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 LANCL2Q9NS86 450 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 INTS9Q9NV88 658 aaKnown RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 TMEM216Q9P0N5 145 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PLLPQ9Y342 182 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PCDHGB7Q9Y5F8 929 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 SPTA1P02549 2419 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 LOC102723996A0A087X1L8 192 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 A0A088AWK7 358 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 A8MT66 165 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 STX16O14662 325 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 B3GALT2O43825 422 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 KLHL41O60662 606 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 DPM1O60762 260 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 SEC24DO94855 1032 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 TGFB1P01137 390 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CELA2AP08217 269 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 SBK3P0C264 359 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 RNH1P13489 461 aaKnown RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CHN1P15882 459 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 TAC1P20366 129 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF10P21506 573 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CERS1P27544 350 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 RHAGQ02094 409 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 TGM3Q08188 693 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 NSDHLQ15738 373 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CPSF6Q16630 551 aaKnown RBP eCLIP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ADPRMQ3LIE5 342 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ANKRD37Q7Z713 158 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 LAS2Q8IYD9 372 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 RNF175Q8N4F7 328 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 OR7G3Q8NG95 312 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 NSUN5Q96P11 429 aaKnown RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 CDK15Q96Q40 435 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 MS4A8Q9BY19 250 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 LHPPQ9H008 270 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF700Q9H0M5 742 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 SEMA4BQ9NPR2 832 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-216ENST00000575599 LUZP4Q9P127 313 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 PCTPQ9UKL6 214 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 SCN2AQ99250 2005 aa12.48□□□□□ -0.41
RPAIN-216ENST00000575599 SPENQ96T58 3664 aaKnown RBP12.47□□□□□ -0.41
RPAIN-216ENST00000575599 A0A1W2PQ72 361 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 FAM227AF5H4B4 570 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 SAP18O00422 153 aaKnown RBP12.47□□□□□ -0.41
RPAIN-216ENST00000575599 OR7A17O14581 309 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 CYC1P08574 325 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 SERPINB1P30740 379 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 CASRP41180 1078 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 CD97P48960 835 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 CCNG1P51959 295 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 MTTPP55157 894 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 SOX8P57073 446 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 PHEXP78562 749 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 TLE1Q04724 770 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 PCDH1Q08174 1060 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 RUNX2Q13950 521 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 AGAP7PQ5VUJ5 663 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 LIPJQ5W064 366 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
RPAIN-216ENST00000575599 ABHD17CQ6PCB6 329 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 RPS27LQ71UM5 84 aaKnown RBP12.47□□□□□ -0.41
RPAIN-216ENST00000575599 AMER2Q8N7J2 671 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 OR52B6Q8NGF0 335 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 HUS1BQ8NHY5 278 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 PPP1R14CQ8TAE6 165 aa12.47□□□□□ -0.41
RPAIN-216ENST00000575599 BRIX1Q8TDN6 353 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms