RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 A0A088AWK7 358 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 ARHGEF9O43307 516 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 DNAJB6O75190 326 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 FTCDO95954 541 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 ZSCAN5DPP0CG00 497 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 EPXP11678 715 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 TPSB2P20231 275 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 ZNF10P21506 573 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 ADH7P40394 386 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 ASCL1P50553 236 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 HSD17B7P56937 341 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 TBL3Q12788 808 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 HYAL2Q12891 473 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 CTBP1Q13363 440 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 SNX1Q13596 522 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 BMPR2Q13873 1038 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 DHX34Q14147 1143 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 RCN2Q14257 317 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG6-218ENST00000575454 TPSAB1Q15661 275 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 CCNG2Q16589 344 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 DUPD1Q68J44 220 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 DRICH1Q6PGQ1 229 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 OPN5Q6U736 354 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 IL20RBQ6UXL0 311 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 HSDL2Q6YN16 418 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 MAATS1Q7Z4T9 603 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 KIAA1328Q86T90 577 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 PRUNE1Q86TP1 453 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 SLC13A5Q86YT5 568 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 CPNE9Q8IYJ1 553 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 MYO1HQ8N1T3 1032 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 TMEM251Q8N6I4 163 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 GOLM1Q8NBJ4 401 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 C7orf57Q8NEG2 295 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 WFDC11Q8NEX6 87 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 OR5L2Q8NGL0 311 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 SPATA3Q8NHX4 192 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 CD200R1Q8TD46 325 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 CALML6Q8TD86 181 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 NUDT8Q8WV74 236 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 DAZLQ92904 295 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 ARSGQ96EG1 525 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 FAR2Q96K12 515 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 GPR21Q99679 349 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 NPLQ9BXD5 320 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 TRIM54Q9BYV2 358 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 RHBGQ9H310 441 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 EXO5Q9H790 373 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 PNO1Q9NRX1 252 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 SACM1LQ9NTJ5 587 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 ZNF629Q9UEG4 869 aaPredicted RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 TRMT6Q9UJA5 497 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 CBLCQ9ULV8 474 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 PDE10AQ9Y233 779 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 MRPS33Q9Y291 106 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 ZKSCAN5Q9Y2L8 839 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 MED16Q9Y2X0 877 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 CLCA3PQ9Y6N3 262 aa8.35□□□□□ -1.07
SMG6-218ENST00000575454 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.35□□□□□ -1.07
SMG6-218ENST00000575454 NUP210LQ5VU65 1888 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 TRGV5A0A0B4J1U4 118 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 ATP6AP2A0A1C7CYW4 349 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 PINLYPA6NC86 204 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 TUBAL3A6NHL2 446 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 SDR42E2A6NKP2 422 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 CES2O00748 559 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 ATP6AP2O75787 350 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 OR6B1O95007 311 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 P04436 131 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 SERPINA6P08185 405 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 PTMSP20962 102 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 HPDP32754 393 aaPredicted RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 MAGEA5P43359 124 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 SCTRP47872 440 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 GPR143P51810 404 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 AP1S2P56377 157 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 RAB8AP61006 207 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 STXBP1P61764 594 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 PCBP2Q15366 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG6-218ENST00000575454 ELAVL1Q15717 326 aaKnown RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 XKR6Q5GH73 641 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 TMEM198Q66K66 360 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 FAM47EQ6ZV65 393 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 Q71RC1 249 aaPredicted RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 SCUBE1Q8IWY4 988 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 ZNF595Q8IYB9 648 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 CA13Q8N1Q1 262 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 MORN4Q8NDC4 146 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 OR8K3Q8NH51 312 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 GABPB2Q8TAK5 448 aaPredicted RBP8.34□□□□□ -1.07
SMG6-218ENST00000575454 SLC5A11Q8WWX8 675 aa8.34□□□□□ -1.07
SMG6-218ENST00000575454 PDLIM2Q96JY6 352 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms