RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SSR4P51571 173 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 HSD17B7P56937 341 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 BTN3A2P78410 334 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 SLC13A2Q13183 592 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 MORF4L2Q15014 288 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 STEAP4Q687X5 459 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 TMIGD1Q6UXZ0 262 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 SPNS3Q6ZMD2 512 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 MDGA2Q7Z553 956 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 GPALPP1Q8IXQ4 340 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 NKAPQ8N5F7 415 aaKnown RBP9.73□□□□□ -0.85
TVP23B-208ENST00000575261 PSD4Q8NDX1 1056 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 CCT6BQ92526 530 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 SLCO2A1Q92959 643 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 NCLNQ969V3 563 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 LRRC39Q96DD0 335 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 SEC16BQ96JE7 1060 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 AICDAQ9GZX7 198 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
TVP23B-208ENST00000575261 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 PRTFDC1Q9NRG1 225 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 PNO1Q9NRX1 252 aaKnown RBP9.73□□□□□ -0.85
TVP23B-208ENST00000575261 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 HPF1Q9NWY4 346 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 KCMF1Q9P0J7 381 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 ZNF223Q9UK11 482 aaPredicted RBP9.73□□□□□ -0.85
TVP23B-208ENST00000575261 ERVK-11Q9UQG0 969 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 YARS2Q9Y2Z4 477 aaKnown RBP9.73□□□□□ -0.85
TVP23B-208ENST00000575261 OARD1Q9Y530 152 aa9.73□□□□□ -0.85
TVP23B-208ENST00000575261 A0A0G2JN53 185 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 LRIT2A6NDA9 550 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 FAM90A27PA6NNH2 459 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 CDC7O00311 574 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 H2AFYO75367 372 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 ZFAND5O76080 213 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 C1GALT1C1LP0DN25 315 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 IGFBP2P18065 325 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 PPP2R1BP30154 601 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 HNRNPH1P31943 449 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 RAB38P57729 211 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 RCN2Q14257 317 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 FRG1Q14331 258 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 SLBPQ14493 270 aaKnown RBP eCLIP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 ZNF460Q14592 562 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 TESK1Q15569 626 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 TSNQ15631 228 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 ELAVL1Q15717 326 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 HP1BP3Q5SSJ5 553 aaPredicted RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 TRIM40Q6P9F5 258 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 PAOXQ6QHF9 649 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 ZNF595Q8IYB9 648 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 KLHDC8AQ8IYD2 350 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 KRT78Q8N1N4 520 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 MARVELD2Q8N4S9 558 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 OR2L5Q8NG80 312 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 ASB15Q8WXK1 588 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 RND1Q92730 232 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 MS4A6EQ96DS6 147 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 WDR83Q9BRX9 315 aaKnown RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 PITHD1Q9GZP4 211 aaPredicted RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 COPS7BQ9H9Q2 264 aaPredicted RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 SNX12Q9UMY4 172 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 TEX264Q9Y6I9 313 aa9.72□□□□□ -0.85
TVP23B-208ENST00000575261 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
TVP23B-208ENST00000575261 INTS1Q8N201 2190 aaKnown RBP9.71□□□□□ -0.85
TVP23B-208ENST00000575261 FAM95CA0A1B0GW59 222 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 TGFBR3LH3BV60 316 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 CLEC3AO75596 197 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 OR2J2O76002 312 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 MSX1P28360 303 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 SLC6A12P48065 614 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 GPR143P51810 404 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 HNRNPFP52597 415 aaKnown RBP9.71□□□□□ -0.86
TVP23B-208ENST00000575261 PLGLB1Q02325 96 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 TFF3Q07654 80 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 MGAT5Q09328 741 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 RUNX2Q13950 521 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 GK5Q6ZS86 529 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 ACAD11Q709F0 780 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 CLNKQ7Z7G1 428 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 SLC22A16Q86VW1 577 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 ZC3HC1Q86WB0 502 aaKnown RBP9.71□□□□□ -0.86
TVP23B-208ENST00000575261 SLC35F6Q8N357 371 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 TCAIMQ8N3R3 496 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 TMEM132CQ8N3T6 1108 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 TMEM52Q8NDY8 209 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 OR2M7Q8NG81 312 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 OR14A16Q8NHC5 309 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 LILRB4Q8NHJ6 448 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 DAZLQ92904 295 aaKnown RBP9.71□□□□□ -0.86
TVP23B-208ENST00000575261 RHBDF1Q96CC6 855 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 VPS39Q96JC1 886 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 SERINC2Q96SA4 455 aa9.71□□□□□ -0.86
TVP23B-208ENST00000575261 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms