RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ADAM21Q9UKJ8 722 aa11.24□□□□□ -0.61
NDE1-206ENST00000572967 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
NDE1-206ENST00000572967 ZNF451Q9Y4E5 1061 aa11.24□□□□□ -0.61
NDE1-206ENST00000572967 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
NDE1-206ENST00000572967 MDC1Q14676 2089 aaKnown RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 IGKV1-8A0A0C4DH67 115 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 MANBAO00462 879 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 UBFD1O14562 309 aaKnown RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 FFAR3O14843 346 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 GPR42O15529 346 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ITM2AO43736 263 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CTSVO60911 334 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CEACAM4O75871 244 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 SORBS2O94875 1100 aaKnown RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 UMODP07911 640 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ALAS2P22557 587 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 PTX3P26022 381 aaPredicted RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 ARFIP1P53367 373 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 VSX2P58304 361 aaPredicted RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 DDX39BQ13838 428 aaKnown RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 NDUFA9Q16795 377 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 TMEM35AQ53FP2 167 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 YOD1Q5VVQ6 348 aaPredicted RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 SHISA6Q6ZSJ9 500 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ACAD11Q709F0 780 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 MED25Q71SY5 747 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ASPGQ86U10 573 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ATCAYQ86WG3 371 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 LRRC34Q8IZ02 419 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 TTC29Q8NA56 475 aaPredicted RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CPT1CQ8TCG5 803 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 STON2Q8WXE9 905 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 C19orf60Q96EN9 201 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CMTM7Q96FZ5 175 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 PPP3R2Q96LZ3 170 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 SHCBP1LQ9BZQ2 653 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ROGDIQ9GZN7 287 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 SLCO1B3Q9NPD5 702 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 SLC22A11Q9NSA0 550 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CUTCQ9NTM9 273 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 FGFR1OP2Q9NVK5 253 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 CTSFQ9UBX1 484 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 ZNF490Q9ULM2 529 aaPredicted RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 SH2B3Q9UQQ2 575 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 FIS1Q9Y3D6 152 aa11.23□□□□□ -0.61
NDE1-206ENST00000572967 SPENQ96T58 3664 aaKnown RBP11.23□□□□□ -0.61
NDE1-206ENST00000572967 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SERTM1A2A2V5 107 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 PEX12O00623 359 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 DSCR3O14972 297 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 NDUFS4O43181 175 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 DPM1O60762 260 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 MYO1DO94832 1006 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SEMA3DO95025 777 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SERPINA6P08185 405 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 CD22P20273 847 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 MAPK1P28482 360 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 BCL6P41182 706 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 GCGRP47871 477 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 RAP1GDS1P52306 607 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 YBX1P67809 324 aaKnown RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 MAD2L1Q13257 205 aaPredicted RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 SSPNQ14714 243 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 GRM7Q14831 915 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 DCAF10Q5QP82 559 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 VWA5B1Q5TIE3 1220 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SLC6A19Q695T7 634 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 CLEC6AQ6EIG7 209 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 FRMPD2BQ6IN97 320 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 ANKRD12Q6UB98 2062 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 COX15Q7KZN9 410 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 ABHD13Q7L211 337 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 PPP1R32Q7Z5V6 425 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.61
NDE1-206ENST00000572967 FAM9CQ8IZT9 166 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 CSNK1A1LQ8N752 337 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 CLEC1AQ8NC01 280 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 SLC13A3Q8WWT9 602 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 FKBP10Q96AY3 582 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 QRFPRQ96P65 431 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 ZNF317Q96PQ6 595 aaPredicted RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 SOX17Q9H6I2 414 aaPredicted RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 DMRT3Q9NQL9 472 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 P4HTMQ9NXG6 502 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 HEATR5BQ9P2D3 2071 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 MARCOQ9UEW3 520 aaPredicted RBP11.22□□□□□ -0.61
NDE1-206ENST00000572967 ZDHHC2Q9UIJ5 367 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 DNAJC15Q9Y5T4 150 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 USH1CQ9Y6N9 552 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 MAU2Q9Y6X3 613 aa11.22□□□□□ -0.61
NDE1-206ENST00000572967 GOLGA8QA0A0J9YX86 632 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 GOLGA8OA6NCC3 632 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms