RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
NPLOC4-210ENST00000572824 XAB2Q9HCS7 855 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-210ENST00000572824 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
NPLOC4-210ENST00000572824 TRMT6Q9UJA5 497 aaKnown RBP8.67□□□□□ -1.02
NPLOC4-210ENST00000572824 CHMP2BQ9UQN3 213 aa8.67□□□□□ -1.02
NPLOC4-210ENST00000572824 TRAV17A0A0B4J275 112 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 MYOCOSA0A1B0GUC4 107 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 OR5H15A6NDH6 313 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 A8MUA0 341 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 FAM227AF5H4B4 570 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 H3BS24 57 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 PGRMC1O00264 195 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 CDC7O00311 574 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TP73O15350 636 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 NDUFS4O43181 175 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 SERPIND1P05546 499 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ZNF888P0CJ79 500 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ENO3P13929 434 aaPredicted RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 NPPBP16860 134 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 PGAM1P18669 254 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 MAOAP21397 527 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 IVDP26440 423 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TNFRSF8P28908 595 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 PPP2R1BP30154 601 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 SSTR4P31391 388 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 RFC3P40938 356 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 HNRNPFP52597 415 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ABATP80404 500 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ABRAXAS2Q15018 415 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 C3AR1Q16581 482 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TTLL9Q3SXZ7 439 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 DEFB134Q4QY38 66 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ZNF766Q5HY98 468 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 GARNL3Q5VVW2 1013 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 UGT3A1Q6NUS8 523 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TUBA3EQ6PEY2 450 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 PAPD4Q6PIY7 484 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 C4orf22Q6V702 233 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 FGD2Q7Z6J4 655 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 THAP5Q7Z6K1 395 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ASPGQ86U10 573 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 C17orf64Q86WR6 236 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TICAM1Q8IUC6 712 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 CHERPQ8IWX8 916 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 GPATCH11Q8N954 259 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 MDS2Q8NDY4 140 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TMEM52Q8NDY8 209 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 MAIP1Q8WWC4 291 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 HAS2Q92819 552 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 MVB12AQ96EY5 273 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 FAM167BQ9BTA0 163 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 CCDC68Q9H2F9 335 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TMEM184CQ9NVA4 438 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 TRMT1Q9NXH9 659 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 CDC14AQ9UNH5 594 aa8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-210ENST00000572824 HCFC1P51610 2035 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 DNALI1O14645 258 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 OR1F1O43749 312 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ZBTB14O43829 449 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 PRAMEF2O60811 474 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 B4GALT2O60909 372 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 POU3F2P20265 443 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 SAT1P21673 171 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 FDXRP22570 491 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CD96P40200 585 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ELK3P41970 407 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 AVPR1BP47901 424 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 KRTAP10-9P60411 292 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 RAB8AP61006 207 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 RPS15AP62244 130 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 FAM53BQ14153 422 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 USP10Q14694 798 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 OR1C1Q15619 314 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ACER2Q5QJU3 275 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 HECTD2Q5U5R9 776 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ABHD17BQ5VST6 288 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 FAM219BQ5XKK7 198 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CAPN13Q6MZZ7 669 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 RPUSD3Q6P087 351 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 LCTLQ6UWM7 567 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 SBSNQ6UWP8 590 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 C16orf47Q6ZP98 133 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CNTN4Q8IWV2 1026 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 PPIL6Q8IXY8 311 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 SPATA6LQ8N4H0 392 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CPSF7Q8N684 471 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 MFSD9Q8NBP5 474 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ANKRD49Q8WVL7 239 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 UBE2FQ969M7 185 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 NEIL2Q969S2 332 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms