RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SOX3P41225 446 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 KIR2DL3P43628 341 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 RGS4P49798 205 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 DGKQP52824 942 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 SARNPP82979 210 aaKnown RBP18.43■□□□□ 0.54
CCDC40-206ENST00000572083 TIAL1Q01085 375 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCDC40-206ENST00000572083 LTBQ06643 244 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 SKOR2Q2VWA4 1001 aaPredicted RBP18.43■□□□□ 0.54
CCDC40-206ENST00000572083 XKR6Q5GH73 641 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 HECTD2Q5U5R9 776 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 CDC20BQ86Y33 519 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 TMEM139Q8IV31 216 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 TMEM251Q8N6I4 163 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 ANKRD53Q8N9V6 530 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 NEIL2Q969S2 332 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 BAG1Q99933 345 aaPredicted RBP18.43■□□□□ 0.54
CCDC40-206ENST00000572083 SMR3AQ99954 134 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 FBXO5Q9UKT4 447 aa18.43■□□□□ 0.54
CCDC40-206ENST00000572083 GLSO94925 669 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-206ENST00000572083 IGHG3P01860 377 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 CELA3AP09093 270 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 PTMSP20962 102 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 GPR143P51810 404 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 ZNF75DP51815 510 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 CSHL1Q14406 222 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 SLC25A35Q3KQZ1 300 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 DUPD1Q68J44 220 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 RGS9BPQ6ZS82 235 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 TRILQ7L0X0 811 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 OR56A3Q8NH54 315 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 GOT1L1Q8NHS2 421 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-206ENST00000572083 SLC5A11Q8WWX8 675 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 LINGO1Q96FE5 620 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 AICDAQ9GZX7 198 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 CLK4Q9HAZ1 481 aaKnown RBP18.42■□□□□ 0.54
CCDC40-206ENST00000572083 ARL15Q9NXU5 204 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 PPIEQ9UNP9 301 aaKnown RBP18.42■□□□□ 0.54
CCDC40-206ENST00000572083 MMACHCQ9Y4U1 282 aa18.42■□□□□ 0.54
CCDC40-206ENST00000572083 NSD1Q96L73 2696 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-206ENST00000572083 URADA6NGE7 173 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 GOLGA8MH3BSY2 632 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 WWP2O00308 870 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 ZFAND5O76080 213 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 HIST1H2AGP0C0S8 130 aaPredicted RBP18.41■□□□□ 0.54
CCDC40-206ENST00000572083 SMIM10L1P0DMW3 83 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 HIST1H2ADP20671 130 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 UQCRC1P31930 480 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 AHRP35869 848 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 HNRNPFP52597 415 aaKnown RBP18.41■□□□□ 0.54
CCDC40-206ENST00000572083 REEP5Q00765 189 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 GPS1Q13098 491 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 ZNF750Q32MQ0 723 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 TOR1AIP1Q5JTV8 583 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 C1orf185Q5T7R7 199 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 NDUFAF5Q5TEU4 345 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 ARMC3Q5W041 872 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 UGT3A1Q6NUS8 523 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 PAQR3Q6TCH7 311 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 GK5Q6ZS86 529 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 SCUBE1Q8IWY4 988 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 GPALPP1Q8IXQ4 340 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 FAM109AQ8N4B1 249 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 SMIM10Q96HG1 83 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 HIST1H2AHQ96KK5 128 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 RASL10BQ96S79 203 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 HIST1H2AJQ99878 128 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 H2AFJQ9BTM1 129 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 CNPPD1Q9BV87 410 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 DMRT3Q9NQL9 472 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 ALKBH4Q9NXW9 302 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 ACAD8Q9UKU7 415 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 CLDN16Q9Y5I7 305 aa18.41■□□□□ 0.54
CCDC40-206ENST00000572083 A0A0G2JN53 185 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 PABPN1LA6NDY0 278 aaKnown RBP18.4■□□□□ 0.54
CCDC40-206ENST00000572083 A6NNC1 897 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 WDR1O75083 606 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 RBBP5Q15291 538 aaKnown RBP18.4■□□□□ 0.54
CCDC40-206ENST00000572083 HSP90AA5PQ58FG0 334 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 TMPRSS11BQ86T26 416 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 TMEM52Q8NDY8 209 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 TRPV3Q8NET8 790 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 WFDC11Q8NEX6 87 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 CALML6Q8TD86 181 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 FAM173AQ9BQD7 235 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 PRTFDC1Q9NRG1 225 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 IARS2Q9NSE4 1012 aaKnown RBP18.4■□□□□ 0.54
CCDC40-206ENST00000572083 MYOTQ9UBF9 498 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 GUCA1BQ9UMX6 200 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 EDARQ9UNE0 448 aa18.4■□□□□ 0.54
CCDC40-206ENST00000572083 EML6Q6ZMW3 1958 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 A0A1B0GVC2 190 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 ATP6AP2A0A1C7CYW4 349 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 MAGEB16A2A368 324 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 SDR42E2A6NKP2 422 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 AQP7O14520 342 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 ATP6AP2O75787 350 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 GUCA1CO95843 209 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 FGGP02679 453 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 MAGEA6P43360 314 aa18.39■□□□□ 0.53
CCDC40-206ENST00000572083 DNASE1L1P49184 302 aa18.39■□□□□ 0.53
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