RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PNO1Q9NRX1 252 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 TENM4Q6N022 2769 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 IGKV3D-11A0A0A0MRZ8 115 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 TCRBV16S1A1N1A0A5B0 115 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 TRIM49D1C9J1S8 452 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 PPP2R1BP30154 601 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 CASP2P42575 452 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 SERPINB9P50453 376 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 ALDH18A1P54886 795 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 LIM2P55344 173 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 TAS2R50P59544 299 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 TGM3Q08188 693 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 SLC13A2Q13183 592 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 MEP1AQ16819 746 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 TECRLQ5HYJ1 363 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 GRHL2Q6ISB3 625 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 GOLGA7Q7Z5G4 137 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 UBE3DQ7Z6J8 389 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 IFT20Q8IY31 132 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 SLC5A8Q8N695 610 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 PTGR2Q8N8N7 351 aaPredicted RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 LRRN4CLQ8ND94 238 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 OR7G3Q8NG95 312 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 DCAKDQ8WVC6 231 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 FAR1Q8WVX9 515 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 UBE2E3Q969T4 207 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 PHF21BQ96EK2 531 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 BARD1Q99728 777 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 SORBS1Q9BX66 1292 aaKnown RBP16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 MS4A8Q9BY19 250 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 OR51B5Q9H339 312 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 CDCP1Q9H5V8 836 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 ACTR8Q9H981 624 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 PRDM7Q9NQW5 492 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 SCN3AQ9NY46 2000 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 ABI3Q9P2A4 366 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 MMACHCQ9Y4U1 282 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 ANKRD12Q6UB98 2062 aa16.66■□□□□ 0.26
CTDNEP1-207ENST00000572043 EXOC1LA0A1B0GW35 172 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 SAGE2PA6NJ88 616 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 TGFBR3LH3BV60 316 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 E2F3O00716 465 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLDN4O14493 209 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 PRAMEF2O60811 474 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 KRT38O76015 456 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 MYO1DO94832 1006 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 RNF224P0DH78 156 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 MAGEA12P43365 314 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 OC90Q02509 493 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 TUBA3CQ13748 450 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 NAA30Q147X3 362 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 H3F3CQ6NXT2 135 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 TUBA3EQ6PEY2 450 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 ZNF793Q6ZN11 406 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 GSPT2Q8IYD1 628 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 LAS2Q8IYD9 372 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 BCORP1Q8N888 145 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 HUS1BQ8NHY5 278 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 KCNC2Q96PR1 638 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 TAAR6Q96RI8 345 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 RNF32Q9H0A6 362 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 OLAHQ9NV23 265 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 DAPP1Q9UN19 280 aa16.65■□□□□ 0.26
CTDNEP1-207ENST00000572043 GABRR3A8MPY1 467 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 KLK8O60259 260 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 FAM153BP0C7A2 387 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 EEF1DP29692 281 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 CD96P40200 585 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 SSR2P43308 183 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 PIK3CGP48736 1102 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 PMP22Q01453 160 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 GTF2H2Q13888 395 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 E2F2Q14209 437 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 FAM153CQ494X1 144 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 SPINK14Q6IE38 97 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 RPUSD3Q6P087 351 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 GTF2H2CQ6P1K8 395 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 SCUBE1Q8IWY4 988 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 ST6GALNAC3Q8NDV1 305 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 ELP5Q8TE02 316 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 SIGLEC12Q96PQ1 595 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 CDK15Q96Q40 435 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 MTERF1Q99551 399 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 UTP23Q9BRU9 249 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 HES7Q9BYE0 225 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 IPPKQ9H8X2 491 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 KLHL1Q9NR64 748 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 FBXW2Q9UKT8 454 aa16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 MRPS33Q9Y291 106 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-207ENST00000572043 TRBV11-1A0A0K0K1C0 115 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CYSRT1A8MQ03 144 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CYR61O00622 381 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RASAL1O95294 804 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 IFNA16P05015 189 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RBP1P09455 135 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms