RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 DAPP1Q9UN19 280 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MRPS33Q9Y291 106 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TEX15Q9BXT5 2789 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ITPR2Q14571 2701 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 GTF3C1Q12789 2109 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NCOA6Q14686 2063 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 A0A087X1B8 175 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FAM227AF5H4B4 570 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CYR61O00622 381 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CLDN4O14493 209 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 B3GALT2O43825 422 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MAN1A2O60476 641 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FAM155BO75949 473 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SCELO95171 688 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 S100BP04271 92 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CD46P15529 392 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TFEBP19484 476 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MST1P26927 711 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 GPR143P51810 404 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MTTPP55157 894 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MLF1P58340 268 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TGM3Q08188 693 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZRSR2Q15696 482 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 XKR6Q5GH73 641 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CEP128Q6ZU80 1094 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CMC1Q7Z7K0 106 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CCDC25Q86WR0 208 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CENPLQ8N0S6 344 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 C7orf57Q8NEG2 295 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KCNC2Q96PR1 638 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ALG9Q9H6U8 611 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LYRM4Q9HD34 91 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 PRDM7Q9NQW5 492 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ACOT9Q9Y305 439 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CENPEQ02224 2701 aa15.98■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HMX2A2RU54 273 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SYCE1LA8MT33 242 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KLK8O60259 260 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MLYCDO95822 493 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MTHFD2P13995 350 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TPP2P29144 1249 aaPredicted RBP15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 EEF1DP29692 281 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ARFIP1P53367 373 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LIM2P55344 173 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 IRF8Q02556 426 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CHIT1Q13231 466 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SLMAPQ14BN4 828 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HIST2H2ACQ16777 129 aaPredicted RBP15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 WHAMMP3Q1A5X7 153 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TMEM35AQ53FP2 167 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KRTCAP3Q53RY4 240 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HIST2H2AA3Q6FI13 130 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 METTL2BQ6P1Q9 378 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 GFRALQ6UXV0 394 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RAPH1Q70E73 1250 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KIF2BQ8N4N8 673 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SNX31Q8N9S9 440 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZNF473Q8WTR7 871 aaKnown RBP15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ESAMQ96AP7 390 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TBCDQ9BTW9 1192 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MS4A8Q9BY19 250 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CDCP1Q9H5V8 836 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ADAP2Q9NPF8 381 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 PRTFDC1Q9NRG1 225 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SEC14L3Q9UDX4 400 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ADGRE2Q9UHX3 823 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ASB1Q9Y576 335 aa15.97■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CACNA1DQ01668 2161 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 A1L4Q6 167 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TGFBR3LH3BV60 316 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 K7EPI3 171 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NME2P1O60361 137 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CCNT2O60583 730 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SP1P08047 785 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NME2P22392 152 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CYB561P49447 251 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HLCSP50747 726 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CLCN2P51788 898 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.153e-7■■■■□ 21.2
MAP1LC3B-208ENST00000570189 ACAP2Q15057 778 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FAM83EQ2M2I3 478 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FBXO48Q5FWF7 155 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SPINK14Q6IE38 97 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SLC25A25Q6KCM7 469 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZNF227Q86WZ6 799 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SLC34A3Q8N130 599 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FAM98AQ8NCA5 519 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CCT6BQ92526 530 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ISL2Q96A47 359 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 VMP1Q96GC9 406 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FRMD6Q96NE9 622 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LRRC1Q9BTT6 524 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ACSS3Q9H6R3 686 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KCMF1Q9P0J7 381 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LRFN1Q9P244 771 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 OPTCQ9UBM4 332 aa15.96■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FCHO1O14526 889 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms