RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SORT1Q99523 831 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SARGQ9BW04 601 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 LHPPQ9H008 270 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SPNS1Q9H2V7 528 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF552Q9H707 407 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 EML4Q9HC35 981 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SLCO1B3Q9NPD5 702 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 MAP10Q9P2G4 905 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 OPTCQ9UBM4 332 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 HAO1Q9UJM8 370 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF860A6NHJ4 632 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 RDH16O75452 317 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 JRKO75564 520 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 LYPLA1O75608 230 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-225ENST00000569245 HSPA4LO95757 839 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 MLYCDO95822 493 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 VIMP08670 466 aaKnown RBP13.67□□□□□ -0.22
COMMD4-225ENST00000569245 C8orf89P0DMQ9 161 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 C1GALT1C1LP0DN25 315 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 AHRP35869 848 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 SEC24CP53992 1094 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 SKP1P63208 163 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 FOXK1P85037 733 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 REEP5Q00765 189 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 CDC16Q13042 620 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 LCP2Q13094 533 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 GTF2H2Q13888 395 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 DEFB134Q4QY38 66 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 GTF2H2CQ6P1K8 395 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 ABHD13Q7L211 337 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 PDSS2Q86YH6 399 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 KBTBD2Q8IY47 623 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 ZADH2Q8N4Q0 377 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 RBMXL3Q8N7X1 1067 aaKnown RBP13.67□□□□□ -0.22
COMMD4-225ENST00000569245 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF395Q9H8N7 513 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-225ENST00000569245 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 DNAJC11Q9NVH1 559 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 STK38LQ9Y2H1 464 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 RAP2CQ9Y3L5 183 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
COMMD4-225ENST00000569245 URADA6NGE7 173 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 PCDH17O14917 1159 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CLGNO14967 610 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CCNT2O60583 730 aaKnown RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 TGDSO95455 350 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CHRNGP07510 517 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF888P0CJ79 500 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 COX6A1P12074 109 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 EPB42P16452 691 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ALOX12P18054 663 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CDH13P55290 713 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 SLBPQ14493 270 aaKnown RBP eCLIP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 SLC6A19Q695T7 634 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 RPS27LQ71UM5 84 aaKnown RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ATCAYQ86WG3 371 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CRLF3Q8IUI8 442 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 KIRREL3Q8IZU9 778 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 KRT78Q8N1N4 520 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ANKRD53Q8N9V6 530 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 NT5CQ8TCD5 201 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CPT1CQ8TCG5 803 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 CCT6BQ92526 530 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 PNPLA2Q96AD5 504 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 PEX11GQ96HA9 241 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF382Q96SR6 550 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 RBCK1Q9BYM8 510 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 VN1R1Q9GZP7 353 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 SEMA4BQ9NPR2 832 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-225ENST00000569245 FGFR1OP2Q9NVK5 253 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 MED13Q9UHV7 2174 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 MYO18BQ8IUG5 2567 aa13.66□□□□□ -0.22
COMMD4-225ENST00000569245 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 OR2W5A6NFC9 320 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 UBFD1O14562 309 aaKnown RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 GALR3O60755 368 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 CDC123O75794 336 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 B3GALT4O96024 378 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 DRD4P21917 467 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 CD97P48960 835 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 PKNOX1P55347 436 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 RAB8AP61006 207 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 OLR1P78380 273 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 PCDH1Q08174 1060 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 Q0VFX4 171 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 PLEKHN1Q494U1 663 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-225ENST00000569245 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 TOR1AIP1Q5JTV8 583 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 NIPAL1Q6NVV3 410 aa13.65□□□□□ -0.22
COMMD4-225ENST00000569245 IGFL3Q6UXB1 125 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms