RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 EMBQ6PCB8 327 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 C16orf54Q6UWD8 224 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 DNAJB7Q7Z6W7 309 aaPredicted RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 PIGWQ7Z7B1 504 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 HIPK1Q86Z02 1210 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 APCDD1Q8J025 514 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 TMEM99Q8N816 258 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 LSMEM1Q8N8F7 131 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 IQUBQ8NA54 791 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 OR1B1Q8NGR6 318 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 ALKBH3Q96Q83 286 aaPredicted RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 TEX13BQ9BXU2 312 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 TMX4Q9H1E5 349 aaPredicted RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 PDFQ9HBH1 243 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 DBF4Q9UBU7 674 aaPredicted RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 RUVBL2Q9Y230 463 aaKnown RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 NTNG1Q9Y2I2 539 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 SLC6A5Q9Y345 797 aa2.36□□□□□ -2.03
UBR1-209ENST00000569243 MRPL11Q9Y3B7 192 aaKnown RBP2.36□□□□□ -2.03
UBR1-209ENST00000569243 TRBV5-4A0A0C4DH59 114 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 A0A1B0GTH9 108 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 PGRMC2O15173 223 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 FCGR3BO75015 233 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 FRAT2O75474 233 aaPredicted RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 SIX3O95343 332 aaPredicted RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 SEMA4FO95754 770 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 HCKP08631 526 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ADRA2CP18825 462 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 TIA1P31483 386 aaKnown RBP eCLIP2.35□□□□□ -2.033e-6■■■■□ 20.5
UBR1-209ENST00000569243 RPP38P78345 283 aaKnown RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 CNTN1Q12860 1018 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 FASTKQ14296 549 aaKnown RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 ZNF770Q6IQ21 691 aaPredicted RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 PAMR1Q6UXH9 720 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 MCM10Q7L590 875 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ADCK2Q7Z695 626 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 C5orf24Q7Z6I8 188 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 BEST4Q8NFU0 473 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 OR4Q3Q8NH05 313 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 OCC1Q8TAD7 63 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 CD99L2Q8TCZ2 262 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ITLN1Q8WWA0 313 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 MRPS27Q92552 414 aaKnown RBP2.35□□□□□ -2.03
UBR1-209ENST00000569243 PHYHIPLQ96FC7 376 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ANKRD2Q9GZV1 360 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ST6GALNAC4Q9H4F1 302 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 C5orf66Q9H5L9 145 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 ASB8Q9H765 288 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 SP140LQ9H930 580 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 WDR41Q9HAD4 459 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 LMAN1LQ9HAT1 526 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 KCNK13Q9HB14 408 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 NMUR1Q9HB89 426 aa2.35□□□□□ -2.03
UBR1-209ENST00000569243 C2orf92A0A1B0GVN3 265 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 TMEM129A0AVI4 362 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 TSPY2A6NKD2 308 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 PRSS46E5RG02 174 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 E5RGE8 158 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 HDAC3O15379 428 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 OR6B1O95007 311 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 PDGFBP01127 241 aaPredicted RBP2.34□□□□□ -2.03
UBR1-209ENST00000569243 PTAFRP25105 342 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 SSTR1P30872 391 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 MAPK11Q15759 364 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 CCL14Q16627 93 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 LRRC37A5PQ49AS3 106 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 RFTN2Q52LD8 501 aaPredicted RBP2.34□□□□□ -2.03
UBR1-209ENST00000569243 LBHQ53QV2 105 aaPredicted RBP2.34□□□□□ -2.03
UBR1-209ENST00000569243 C2orf83Q53S99 150 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 ZNF542PQ5EBM4 170 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.34□□□□□ -2.03
UBR1-209ENST00000569243 LEMD1Q68G75 181 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 SLC27A4Q6P1M0 643 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 FAM219AQ8IW50 185 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 CCAR2Q8N163 923 aaKnown RBP2.34□□□□□ -2.03
UBR1-209ENST00000569243 BANPQ8N9N5 519 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 KIF18AQ8NI77 898 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 C8orf46Q8TAG6 207 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 VPS33AQ96AX1 596 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 CCM2Q9BSQ5 444 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 INPP5KQ9BT40 448 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 VIPAS39Q9H9C1 493 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 C3orf14Q9HBI5 128 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 NSG2Q9Y328 171 aa2.34□□□□□ -2.03
UBR1-209ENST00000569243 C5orf52A6NGY3 159 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 FBP2O00757 339 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 MLNRO43193 412 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 PPIP5K2O43314 1243 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 SCO2O43819 266 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 KBTBD11O94819 623 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 CD1DP15813 335 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 SPRP35270 261 aaPredicted RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 RGRP47804 291 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 SLC1A6P48664 564 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 ZNF41P51814 821 aaPredicted RBP2.33□□□□□ -2.04
UBR1-209ENST00000569243 EVCP57679 992 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 CAMK2DQ13557 499 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 ARMCX4Q5H9R4 360 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 NHLRC3Q5JS37 347 aa2.33□□□□□ -2.04
UBR1-209ENST00000569243 MARC1Q5VT66 337 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms