RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ACSF3Q4G176 576 aaPredicted RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 ACSBG2Q5FVE4 666 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 SLC22A10Q63ZE4 541 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 NSUN5P2Q63ZY6 315 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 C11orf63Q6NUN7 778 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 SCIMPQ6UWF3 145 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 SEM1Q6ZVN7 128 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 REXO1L1PQ8IX06 675 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 LRRC56Q8IYG6 542 aaPredicted RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 DND1Q8IYX4 353 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 VWA5B2Q8N398 1253 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 TNIP2Q8NFZ5 429 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 OR8K3Q8NH51 312 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 PERPQ96FX8 193 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 CCDC138Q96M89 665 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 ZNF778Q96MU6 729 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 ZFP3Q96NJ6 502 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 BIRC8Q96P09 236 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 DNAJC7Q99615 494 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 RBM24Q9BX46 236 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 EPB41L4BQ9H329 900 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 NHEJ1Q9H9Q4 299 aaPredicted RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 CALHM2Q9HA72 323 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 ZFP64Q9NPA5 681 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 ADAP2Q9NPF8 381 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 PNO1Q9NRX1 252 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 ZNF226Q9NYT6 803 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 JKAMPQ9P055 326 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 MRPS33Q9Y291 106 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
SMG1-216ENST00000569122 ATG4BQ9Y4P1 393 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 CLCA3PQ9Y6N3 262 aa8.01□□□□□ -1.13
SMG1-216ENST00000569122 SNRNP200O75643 2136 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 PHF3Q92576 2039 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 CD8B2A6NJW9 211 aa8□□□□□ -1.13
SMG1-216ENST00000569122 G3V3Y1 287 aa8□□□□□ -1.13
SMG1-216ENST00000569122 GOLGA6L22H0YM25 854 aa8□□□□□ -1.13
SMG1-216ENST00000569122 GFYI3L273 518 aa8□□□□□ -1.13
SMG1-216ENST00000569122 OR1F1O43749 312 aa8□□□□□ -1.13
SMG1-216ENST00000569122 LCMT2O60294 686 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 SERPIND1P05546 499 aa8□□□□□ -1.13
SMG1-216ENST00000569122 IMPA1P29218 277 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CTNNA1P35221 906 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 CYLC1P35663 651 aaPredicted RBP8□□□□□ -1.13
SMG1-216ENST00000569122 AHRP35869 848 aa8□□□□□ -1.13
SMG1-216ENST00000569122 COILP38432 576 aaPredicted RBP8□□□□□ -1.13
SMG1-216ENST00000569122 RPL21P46778 160 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 CPA2P48052 419 aa8□□□□□ -1.13
SMG1-216ENST00000569122 GPR143P51810 404 aa8□□□□□ -1.13
SMG1-216ENST00000569122 ZNF136P52737 540 aa8□□□□□ -1.13
SMG1-216ENST00000569122 DIO3P55073 304 aa8□□□□□ -1.13
SMG1-216ENST00000569122 RWDD2BP57060 319 aa8□□□□□ -1.13
SMG1-216ENST00000569122 SNRPNP63162 240 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 HYAL2Q12891 473 aa8□□□□□ -1.13
SMG1-216ENST00000569122 ELAVL1Q15717 326 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 XKR6Q5GH73 641 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CTSL3PQ5NE16 218 aa8□□□□□ -1.13
SMG1-216ENST00000569122 LRRC8EQ6NSJ5 796 aa8□□□□□ -1.13
SMG1-216ENST00000569122 POMZP3Q6PJE2 187 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CLEC17AQ6ZS10 378 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CAND1Q86VP6 1230 aaKnown RBP8□□□□□ -1.13
SMG1-216ENST00000569122 HIPK1Q86Z02 1210 aa8□□□□□ -1.13
SMG1-216ENST00000569122 PALM2Q8IXS6 379 aa8□□□□□ -1.13
SMG1-216ENST00000569122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8□□□□□ -1.13
SMG1-216ENST00000569122 SHISA5Q8N114 240 aa8□□□□□ -1.13
SMG1-216ENST00000569122 MEIOBQ8N635 442 aa8□□□□□ -1.13
SMG1-216ENST00000569122 NAXEQ8NCW5 288 aa8□□□□□ -1.13
SMG1-216ENST00000569122 MORN4Q8NDC4 146 aa8□□□□□ -1.13
SMG1-216ENST00000569122 TRPV3Q8NET8 790 aa8□□□□□ -1.13
SMG1-216ENST00000569122 NT5CQ8TCD5 201 aa8□□□□□ -1.13
SMG1-216ENST00000569122 PDLIM2Q96JY6 352 aa8□□□□□ -1.13
SMG1-216ENST00000569122 SCYL1Q96KG9 808 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CAPZA3Q96KX2 299 aa8□□□□□ -1.13
SMG1-216ENST00000569122 CCDC68Q9H2F9 335 aa8□□□□□ -1.13
SMG1-216ENST00000569122 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
SMG1-216ENST00000569122 PIGMQ9H3S5 423 aa8□□□□□ -1.13
SMG1-216ENST00000569122 NECTIN3Q9NQS3 549 aa8□□□□□ -1.13
SMG1-216ENST00000569122 TUBA8Q9NY65 449 aaPredicted RBP8□□□□□ -1.13
SMG1-216ENST00000569122 CNIH4Q9P003 139 aa8□□□□□ -1.13
SMG1-216ENST00000569122 MARCH4Q9P2E8 410 aaPredicted RBP8□□□□□ -1.13
SMG1-216ENST00000569122 SPRR3Q9UBC9 169 aa8□□□□□ -1.13
SMG1-216ENST00000569122 ZNF148Q9UQR1 794 aa8□□□□□ -1.13
SMG1-216ENST00000569122 TLN2Q9Y4G6 2542 aa8□□□□□ -1.13
SMG1-216ENST00000569122 A0A088AWK7 358 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 C15orf38-AP3S2A0A0A6YYH1 394 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 A0A0G2JMM0 328 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 A0A1W2PPB8 328 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 A0A1W2PRS3 328 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 TRBC2A0A5B9 178 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 PABPN1LA6NDY0 278 aaKnown RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 MBD3L4A6NDZ8 208 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 MBD3L5A6NJ08 208 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 KIR3DP1A8MWS1 328 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 EIF3FO00303 357 aaPredicted RBP7.99□□□□□ -1.13
SMG1-216ENST00000569122 WWP2O00308 870 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 NIPSNAP2O75323 286 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 MBD3O95983 291 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 IFNA16P05015 189 aa7.99□□□□□ -1.13
SMG1-216ENST00000569122 CELA3AP09093 270 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms