RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CCNE2O96020 404 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ATP1A1P05023 1023 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FERP16591 822 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CCNA2P20248 432 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 UGT1A1P22309 533 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CD27P26842 260 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FMO5P49326 533 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 GPR143P51810 404 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 LUMP51884 338 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CRYBB1P53674 252 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CASP9P55211 416 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 STX1BP61266 288 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 HNRNPKP61978 463 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PITX1P78337 314 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MRPS34P82930 218 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 COG7P83436 770 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ITGB3BPQ13352 177 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 DRP2Q13474 957 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TRIM29Q14134 588 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PDK1Q15118 436 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAZQ16635 292 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 VWC2Q2TAL6 325 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MYLK3Q32MK0 819 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ANKDD1AQ495B1 522 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TOR1AIP1Q5JTV8 583 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 C6orf136Q5SQH8 315 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM91A1Q658Y4 838 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 KRT39Q6A163 491 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZCCHC12Q6PEW1 402 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 C19orf48Q6RUI8 117 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF852Q6ZMS4 543 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 KCTD8Q6ZWB6 473 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 KCTD9Q7L273 389 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM219AQ8IW50 185 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MFN1Q8IWA4 741 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CCDC60Q8IWA6 550 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MCEMP1Q8IX19 187 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 HACE1Q8IYU2 909 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TBC1D21Q8IYX1 336 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 LRRC43Q8N309 656 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FBXO39Q8N4B4 442 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 UXS1Q8NBZ7 420 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 LRRC8CQ8TDW0 803 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAS1R2Q8TE23 839 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TRPC4APQ8TEL6 797 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ING5Q8WYH8 240 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 EXT2Q93063 718 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 NXNL1Q96CM4 212 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 HARBI1Q96MB7 349 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 GDAP1L1Q96MZ0 367 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 UHRF2Q96PU4 802 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 EPYCQ99645 322 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 UBAC1Q9BSL1 405 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 POLR3CQ9BUI4 534 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF350Q9GZX5 532 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 HSD3B7Q9H2F3 369 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PIGMQ9H3S5 423 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 KCNK15Q9H427 330 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FZD8Q9H461 694 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 NOL11Q9H8H0 719 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 HEBP1Q9NRV9 189 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TBC1D13Q9NVG8 400 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PRMT7Q9NVM4 692 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MIOSQ9NXC5 875 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 DCAF16Q9NXF7 216 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 P4HTMQ9NXG6 502 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAS2R3Q9NYW6 316 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAAR2Q9P1P5 351 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 LARSQ9P2J5 1176 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PRG3Q9Y2Y8 225 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 UBIAD1Q9Y5Z9 338 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 AP1M2Q9Y6Q5 423 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 AKAP13Q12802 2813 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 SHROOM3Q8TF72 1996 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CLUHO75153 1309 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 FRMPD4Q14CM0 1322 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CACNA1BQ00975 2339 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 FRYQ5TBA9 3013 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF638Q14966 1978 aaKnown RBP3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 NUP205Q92621 2012 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 RNF103-CHMP3A0A140T963 221 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZCWPW2A0A1B0GU75 182 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM172BPA6NC97 362 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 C5orf60A6NFR6 353 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 RNF103O00237 685 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC30A4O14863 429 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 TEX28O15482 410 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 KCNN4O15554 427 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNHIT1O43257 154 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZBTB43O43298 467 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 FGF17O60258 216 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 NME6O75414 186 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 AKAP3O75969 853 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 WISP2O76076 250 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 IFNB1P01574 187 aa3.11□□□□□ -1.91
HMGB1P6-201ENST00000569046 HIST1H2ABP04908 130 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms