RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DEFB127Q9H1M4 99 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 ADAP2Q9NPF8 381 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 KCMF1Q9P0J7 381 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 MYOTQ9UBF9 498 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 A0A1B0GVC2 190 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 NPIPA2E9PIF3 369 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 NPIPA3F8WFD2 350 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 GOLGA8MH3BSY2 632 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 DIAPH2O60879 1101 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 WDR1O75083 606 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 CCDC175P0C221 793 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 HNF4AP41235 474 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 RCN2Q14257 317 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 SLC25A35Q3KQZ1 300 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 NXPE4Q6UWF7 544 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 CNTN4Q8IWV2 1026 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 ZNF595Q8IYB9 648 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 FAM109AQ8N4B1 249 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 RPRMLQ8N4K4 120 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 GOLM1Q8NBJ4 401 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 OR10Q1Q8NGQ4 319 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 ANKRD7Q92527 254 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 DAZLQ92904 295 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 NCLNQ969V3 563 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 SGCZQ96LD1 299 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 SMC6Q96SB8 1091 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 FAM173AQ9BQD7 235 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 TTYH2Q9BSA4 534 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 TTTY12Q9BZ98 90 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 RHBGQ9H310 441 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 PRTFDC1Q9NRG1 225 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 PNO1Q9NRX1 252 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 DEPPQ9NTK1 212 aa14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 DNAJB12Q9NXW2 375 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 ZNF223Q9UK11 482 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-215ENST00000568676 PHF3Q92576 2039 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SPG11Q96JI7 2443 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 INTS1Q8N201 2190 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SUSD5O60279 629 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 OR2J2O76002 312 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 GLSO94925 669 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 CNR1P21554 472 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 CDKN2DP55273 166 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 RAB38P57729 211 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SLC13A2Q13183 592 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 CRYMQ14894 314 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 RBBP5Q15291 538 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 ELAVL1Q15717 326 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 HYAL4Q2M3T9 481 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 TOR1AIP1Q5JTV8 583 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 HSDL2Q6YN16 418 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 RTL4Q6ZR62 310 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 TMPRSS11BQ86T26 416 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 THOC6Q86W42 341 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 NAT8LQ8N9F0 302 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 OR8K3Q8NH51 312 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 MAGOHBQ96A72 148 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SARAFQ96BY9 339 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 TSNARE1Q96NA8 513 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 PITHD1Q9GZP4 211 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 SPNS1Q9H2V7 528 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 PNPLA3Q9NST1 481 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 RYDENQ9NUL5 291 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 B4GALT7Q9UBV7 327 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 L3MBTL1Q9Y468 752 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 CLCA3PQ9Y6N3 262 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 ITPR3Q14573 2671 aa14.63□□□□□ -0.07
HERPUD1-215ENST00000568676 AQP7O14520 342 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 H2AFYO75367 372 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 CTAG2O75638 210 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 GUCA1CO95843 209 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 AHSGP02765 367 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 GABRA1P14867 456 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 FOSL1P15407 271 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 GABRB3P28472 473 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 HNMTP50135 292 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 BTN3A2P78410 334 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 SPANXN3Q5MJ09 141 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 RBM20Q5T481 1227 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 FAM45BPQ6NSW5 357 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 IL20RBQ6UXL0 311 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 PPIL6Q8IXY8 311 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 AGGF1Q8N302 714 aaeCLIP14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 MORN4Q8NDC4 146 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 FAM45AQ8TCE6 357 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 RASL10BQ96S79 203 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 NAP1L3Q99457 506 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 POLDIP3Q9BY77 421 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 KLHL31Q9H511 634 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 IL1RL2Q9HB29 575 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 ST6GALNAC2Q9UJ37 374 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 PCDHGB3Q9Y5G1 929 aa14.62□□□□□ -0.07
HERPUD1-215ENST00000568676 TMEM200CA6NKL6 621 aa14.61□□□□□ -0.07
HERPUD1-215ENST00000568676 FAM166BA8MTA8 275 aa14.61□□□□□ -0.07
HERPUD1-215ENST00000568676 B3GALT2O43825 422 aa14.61□□□□□ -0.07
HERPUD1-215ENST00000568676 HCN1O60741 890 aa14.61□□□□□ -0.07
HERPUD1-215ENST00000568676 OR6B1O95007 311 aa14.61□□□□□ -0.07
HERPUD1-215ENST00000568676 GLI4P10075 376 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms