RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PSAT1Q9Y617 370 aa14.46□□□□□ -0.09
NME3-211ENST00000568561 MAP1AP78559 2803 aaPredicted RBP14.46□□□□□ -0.1
NME3-211ENST00000568561 URADA6NGE7 173 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 ERI3O43414 337 aaKnown RBP14.45□□□□□ -0.1
NME3-211ENST00000568561 KRT38O76015 456 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 SERPINA6P08185 405 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 ZNF37AP17032 561 aaPredicted RBP14.45□□□□□ -0.1
NME3-211ENST00000568561 CAPN3P20807 821 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 ELK3P41970 407 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 GDF5P43026 501 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 GALNT7Q86SF2 657 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 ZFP62Q8NB50 900 aaPredicted RBP14.45□□□□□ -0.1
NME3-211ENST00000568561 C16orf52Q8NHV5 167 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 VMP1Q96GC9 406 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 OSBPL9Q96SU4 736 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 NAP1L3Q99457 506 aaPredicted RBP14.45□□□□□ -0.1
NME3-211ENST00000568561 EGFL8Q99944 293 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 TREX2Q9BQ50 279 aaPredicted RBP14.45□□□□□ -0.1
NME3-211ENST00000568561 PRTFDC1Q9NRG1 225 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 ERVK-11Q9UQG0 969 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 MMACHCQ9Y4U1 282 aa14.45□□□□□ -0.1
NME3-211ENST00000568561 GOLGA6L10A0A0M3HER8 536 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 CDK2AP1O14519 115 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 FANCGO15287 622 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 OR2J2O76002 312 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 WDR47O94967 919 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 OR6B1O95007 311 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 IGFBP2P18065 325 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 SSR4P51571 173 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 SLC13A2Q13183 592 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 SLBPQ14493 270 aaKnown RBP eCLIP14.44□□□□□ -0.1
NME3-211ENST00000568561 XKR6Q5GH73 641 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 EMC4Q5J8M3 183 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 ADNP2Q6IQ32 1131 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 PSD4Q8NDX1 1056 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 GAL3ST3Q96A11 431 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 SEC16BQ96JE7 1060 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 FAR2Q96K12 515 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 CSF3RQ99062 836 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 CCDC77Q9BR77 488 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 NAT9Q9BTE0 207 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 TP63Q9H3D4 680 aaPredicted RBP14.44□□□□□ -0.1
NME3-211ENST00000568561 CLK4Q9HAZ1 481 aaKnown RBP14.44□□□□□ -0.1
NME3-211ENST00000568561 TIMMDC1Q9NPL8 285 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 KCNE2Q9Y6J6 123 aa14.44□□□□□ -0.1
NME3-211ENST00000568561 NCF1BA6NI72 391 aaPredicted RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 TMEM200CA6NKL6 621 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 NCF1CA8MVU1 366 aaPredicted RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 TUBB4AP04350 444 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 NCF1P14598 390 aaPredicted RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 CERS1P27544 350 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 SOX3P41225 446 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 GPR143P51810 404 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 NUP107P57740 925 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 STXBP1P61764 594 aaKnown RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 PLGLB1Q02325 96 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 TFF3Q07654 80 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 TERF2Q15554 542 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 TSNQ15631 228 aaKnown RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 FBXO48Q5FWF7 155 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 ARHGAP11AQ6P4F7 1023 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 IL20RBQ6UXL0 311 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 SLCO4C1Q6ZQN7 724 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 ANKMY2Q8IV38 441 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 SLC35F6Q8N357 371 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 OR5M9Q8NGP3 310 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 ACTRT1Q8TDG2 376 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 ANKRD49Q8WVL7 239 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 NRGNQ92686 78 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 MS4A6EQ96DS6 147 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 PDLIM5Q96HC4 596 aaKnown RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 TNFRSF10DQ9UBN6 386 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 CORO1CQ9ULV4 474 aaPredicted RBP14.43□□□□□ -0.1
NME3-211ENST00000568561 LIPGQ9Y5X9 500 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 NCKAP5O14513 1909 aa14.43□□□□□ -0.1
NME3-211ENST00000568561 FAM95CA0A1B0GW59 222 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 USP27XA6NNY8 438 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 A8MVJ9 347 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 NPIPA2E9PIF3 369 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 NPIPA3F8WFD2 350 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 WWP2O00308 870 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 TOXO94900 526 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 TBX6O95947 436 aaPredicted RBP14.42□□□□□ -0.1
NME3-211ENST00000568561 C1GALT1C1LP0DN25 315 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 IVDP26440 423 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 CHRNB4P30926 498 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 SLC6A12P48065 614 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 PLA2G16P53816 162 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 RAB38P57729 211 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 TAS2R39P59534 338 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 PPIAP62937 165 aaKnown RBP14.42□□□□□ -0.1
NME3-211ENST00000568561 PMPCAQ10713 525 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 TMEM211Q6ICI0 200 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 TMIGD1Q6UXZ0 262 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 SPNS3Q6ZMD2 512 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 FRA10AC1Q70Z53 315 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 VN1R5Q7Z5H4 357 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 KLHDC8AQ8IYD2 350 aa14.42□□□□□ -0.1
NME3-211ENST00000568561 ZNF321PQ8N8H1 164 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms