RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RFX4Q33E94 735 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 UBE3DQ7Z6J8 389 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 RNF130Q86XS8 419 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DCP2Q8IU60 420 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 C8orf59Q8N0T1 100 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 OR1E3Q8WZA6 343 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DOHHQ9BU89 302 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ZNF576Q9H609 170 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 MRPS30Q9NP92 439 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 PAPOLBQ9NRJ5 636 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 MAP4K5Q9Y4K4 846 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ORC6Q9Y5N6 252 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 CCDC160A6NGH7 325 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 MYO1GB0I1T2 1018 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 TMEM229AB2RXF0 380 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 TMPRSS11DO60235 418 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DIRAS1O95057 198 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DDX5P17844 614 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 NDUFV2P19404 249 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 UQCRC2P22695 453 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DNAJA1P31689 397 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ACSL1P33121 698 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ALDH9A1P49189 494 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 PRIM2P49643 509 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 RAD23AP54725 363 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ITGA1P56199 1179 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ABATP80404 500 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 SCARB2Q14108 478 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 IQCCQ4KMZ1 466 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 FAM180BQ6P0A1 224 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ENPP7Q6UWV6 458 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 CEP68Q76N32 757 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 THAP5Q7Z6K1 395 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 RPLP0P6Q8NHW5 317 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 C7orf34Q96L11 122 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ING2Q9H160 280 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ABCG4Q9H172 646 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 KIR3DX1Q9H7L2 352 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 DDX31Q9H8H2 851 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 SLC6A20Q9NP91 592 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 SNRNP200O75643 2136 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 GOLGA4Q13439 2230 aaKnown RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 H0Y8X5 98 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 KDM1AO60341 852 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 SERPIND1P05546 499 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 FPR1P21462 350 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 GRK3P35626 688 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 SELENOWP63302 87 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 EEF1A2Q05639 463 aaKnown RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 ZC3H12BQ5HYM0 836 aaKnown RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 TMEM92Q6UXU6 159 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 TRIM69Q86WT6 500 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 FAM20CQ8IXL6 584 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 OR2L3Q8NG85 312 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 OR5P2Q8WZ92 322 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 NMD3Q96D46 503 aaKnown RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 NRBF2Q96F24 287 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 ZNF764Q96H86 408 aaPredicted RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 BARD1Q99728 777 aaKnown RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 TMEM121BQ9BXQ6 578 aaPredicted RBP17.27■□□□□ 0.36
SMPD3-211ENST00000568373 NLNQ9BYT8 704 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 EPS8L2Q9H6S3 715 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 CXorf36Q9H7Y0 433 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 LTB4R2Q9NPC1 389 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 SLAMF7Q9NQ25 335 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 TBC1D29Q9UFV1 150 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 CEPT1Q9Y6K0 416 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 COLEC10Q9Y6Z7 277 aa17.27■□□□□ 0.36
SMPD3-211ENST00000568373 LRIT2A6NDA9 550 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 PDPK1O15530 556 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 DPM1O60762 260 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 IGFBP5P24593 272 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 ELK4P28324 431 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 PEBP1P30086 187 aaKnown RBP17.27■□□□□ 0.35
SMPD3-211ENST00000568373 BCL6P41182 706 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 ELOAQ14241 798 aaKnown RBP17.27■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF630Q2M218 657 aaPredicted RBP17.27■□□□□ 0.35
SMPD3-211ENST00000568373 OR4C11Q6IEV9 310 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 GALNT15Q8N3T1 639 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 NFKBIDQ8NI38 313 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 TMIGD2Q96BF3 282 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 TMEM184CQ9NVA4 438 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 THEGQ9P2T0 379 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 PADI2Q9Y2J8 665 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 SAMHD1Q9Y3Z3 626 aaKnown RBP17.27■□□□□ 0.35
SMPD3-211ENST00000568373 SNX8Q9Y5X2 465 aa17.27■□□□□ 0.35
SMPD3-211ENST00000568373 LOC100130705A0A1B0GUX0 176 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 H3BSA7 217 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 SOX1O00570 391 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-211ENST00000568373 HNRNPA2B1P22626 353 aaKnown RBP17.26■□□□□ 0.35
SMPD3-211ENST00000568373 HLCSP50747 726 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 TPMTP51580 245 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 PLA2G16P53816 162 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 CDK6Q00534 326 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 LAPTM4AQ15012 233 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 TMEM35AQ53FP2 167 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 EOGTQ5NDL2 527 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 SLC30A9Q6PML9 568 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms