RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM227AF5H4B4 570 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 PSMD12O00232 456 aaPredicted RBP23.64■■□□□ 1.37
FANCA-228ENST00000567943 E2F3O00716 465 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 ICAM2P13598 275 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 NSDHLQ15738 373 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 OR7G3Q8NG95 312 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.64■■□□□ 1.37
FANCA-228ENST00000567943 IPPKQ9H8X2 491 aa23.64■■□□□ 1.37
FANCA-228ENST00000567943 COPG1Q9Y678 874 aaKnown RBP23.64■■□□□ 1.37
FANCA-228ENST00000567943 SPTAN1Q13813 2472 aaKnown RBP23.64■■□□□ 1.37
FANCA-228ENST00000567943 NBPF19A0A087WUL8 3843 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 A0A088AWK7 358 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 STX16-NPEPL1H3BU86 382 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 STX16O14662 325 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 CBX6O95503 412 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 F10P00742 488 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 SHBGP04278 402 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 ZNF10P21506 573 aaPredicted RBP23.63■■□□□ 1.37
FANCA-228ENST00000567943 TSFMP43897 325 aaKnown RBP23.63■■□□□ 1.37
FANCA-228ENST00000567943 PIK3CGP48736 1102 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 BTG2P78543 158 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 RUNX2Q13950 521 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 TLR1Q15399 786 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 SFT2D3Q587I9 215 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 METTL2BQ6P1Q9 378 aaKnown RBP23.63■■□□□ 1.37
FANCA-228ENST00000567943 ABHD17CQ6PCB6 329 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 FAM26EQ8N5C1 309 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 QRFPRQ96P65 431 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 MS4A8Q9BY19 250 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 SVILO95425 2214 aa23.63■■□□□ 1.37
FANCA-228ENST00000567943 GOLGA8RI6L899 631 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 B3GALT2O43825 422 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 SH3BGRLO75368 114 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 TGFB1P01137 390 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 SBK3P0C264 359 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 TNFSF10P50591 281 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 TGM3Q08188 693 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 DDX39BQ13838 428 aaKnown RBP23.62■■□□□ 1.37
FANCA-228ENST00000567943 NR6A1Q15406 480 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 BTBD16Q32M84 506 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 LIPJQ5W064 366 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 HAS2Q92819 552 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 PTCHD1Q96NR3 888 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 NPAS2Q99743 824 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 NPLQ9BXD5 320 aaPredicted RBP23.62■■□□□ 1.37
FANCA-228ENST00000567943 COPS7BQ9H9Q2 264 aaPredicted RBP23.62■■□□□ 1.37
FANCA-228ENST00000567943 POLEQ07864 2286 aa23.62■■□□□ 1.37
FANCA-228ENST00000567943 PRMT3O60678 531 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 WDPCPO95876 746 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 CERS1P27544 350 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 SERPINB1P30740 379 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 MTTPP55157 894 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 ACTN3Q08043 901 aaPredicted RBP23.61■■□□□ 1.37
FANCA-228ENST00000567943 EIF2S3LQ2VIR3 472 aaKnown RBP23.61■■□□□ 1.37
FANCA-228ENST00000567943 H3F3CQ6NXT2 135 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 PAPD4Q6PIY7 484 aaKnown RBP23.61■■□□□ 1.37
FANCA-228ENST00000567943 QSOX2Q6ZRP7 698 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 RNF175Q8N4F7 328 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 TMEM151AQ8N4L1 468 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 HUS1BQ8NHY5 278 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 ATP6V1E2Q96A05 226 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 SERINC2Q96SA4 455 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 NOL11Q9H8H0 719 aaKnown RBP23.61■■□□□ 1.37
FANCA-228ENST00000567943 TMEM216Q9P0N5 145 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 PCTPQ9UKL6 214 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 RNF11Q9Y3C5 154 aa23.61■■□□□ 1.37
FANCA-228ENST00000567943 IGKV3D-11A0A0A0MRZ8 115 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 ESPNB1AK53 854 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 OR7A17O14581 309 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 UGDHO60701 494 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 SLU7O95391 586 aaKnown RBP23.6■■□□□ 1.37
FANCA-228ENST00000567943 UQCRHP07919 91 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 ARL1P40616 181 aaPredicted RBP23.6■■□□□ 1.37
FANCA-228ENST00000567943 SLCO1A2P46721 670 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 OR4D2P58180 307 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 VSNL1P62760 191 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 ARG2P78540 354 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 CPSF6Q16630 551 aaKnown RBP eCLIP23.6■■□□□ 1.37
FANCA-228ENST00000567943 FCRLBQ6BAA4 426 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 CHSY3Q70JA7 882 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 UBE3DQ7Z6J8 389 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 SRFBP1Q8NEF9 429 aaKnown RBP23.6■■□□□ 1.37
FANCA-228ENST00000567943 ACMSDQ8TDX5 336 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 MZB1Q8WU39 189 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 CMTM7Q96FZ5 175 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 NSUN5Q96P11 429 aaKnown RBP23.6■■□□□ 1.37
FANCA-228ENST00000567943 KCNC2Q96PR1 638 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 PRDM7Q9NQW5 492 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 ADGRE2Q9UHX3 823 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 PCDHGA11Q9Y5H2 935 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 ZGRF1Q86YA3 2104 aa23.6■■□□□ 1.37
FANCA-228ENST00000567943 SMIM23A6NLE4 172 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 CYSRT1A8MQ03 144 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 A8MT66 165 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 RTCAO00442 366 aaKnown RBP23.59■■□□□ 1.37
FANCA-228ENST00000567943 MAN1A2O60476 641 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 SEMA7AO75326 666 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 PYGBP11216 843 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 MAOAP21397 527 aa23.59■■□□□ 1.37
FANCA-228ENST00000567943 CCNG1P51959 295 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms