RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 AZIN1O14977 448 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 NDUFS4O43181 175 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 CCNT2O60583 730 aaKnown RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 VPS4BO75351 444 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 DNAJB5O75953 348 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 CYC1P08574 325 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 UROSP10746 265 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 SCTRP47872 440 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 CCNG1P51959 295 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 EMP2P54851 167 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 CDH13P55290 713 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 PCDH1Q08174 1060 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 KLRB1Q12918 225 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 GGTA1PQ4G0N0 100 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 SPDYAQ5MJ70 313 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 METTL21CQ5VZV1 264 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 KANK2Q63ZY3 851 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ATG14Q6ZNE5 492 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ASB18Q6ZVZ8 466 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ACAD11Q709F0 780 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 GOLGA7Q7Z5G4 137 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 DTWD1Q8N5C7 304 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 TEX19Q8NA77 164 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 NT5CQ8TCD5 201 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ATP6V1E2Q96A05 226 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 EHD1Q9H4M9 534 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ZNF395Q9H8N7 513 aaPredicted RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 IPPKQ9H8X2 491 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 SEMA4BQ9NPR2 832 aaPredicted RBP12.71□□□□□ -0.37
CLK3-218ENST00000566926 PNPOQ9NVS9 261 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 GPR83Q9NYM4 423 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 C3orf18Q9UK00 162 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.37
CLK3-218ENST00000566926 CFAP46Q8IYW2 2715 aa12.71□□□□□ -0.38
CLK3-218ENST00000566926 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 GOLGA8QA0A0J9YX86 632 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 GOLGA8OA6NCC3 632 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 GOLGA8NF8WBI6 632 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SUV39H1O43463 412 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SLC28A2O43868 658 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 CCDC22O60826 627 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ALPPP05187 535 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SERPIND1P05546 499 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 HEXBP07686 556 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 KITP10721 976 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 IL10P22301 178 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 GDF5P43026 501 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SOX8P57073 446 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ZNF33BQ06732 778 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
CLK3-218ENST00000566926 ZSCAN26Q16670 478 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 VWA2Q5GFL6 755 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ATG9BQ674R7 924 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 EPGNQ6UW88 154 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SHISA6Q6ZSJ9 500 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 PRICKLE2Q7Z3G6 844 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
CLK3-218ENST00000566926 PRSS58Q8IYP2 241 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 AMER3Q8N944 861 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 KCT2Q8NC54 265 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 OR9A4Q8NGU2 314 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ZCCHC10Q8TBK6 192 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 LRRC37BQ96QE4 947 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 SLC29A3Q9BZD2 475 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 NT5DC2Q9H857 520 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
CLK3-218ENST00000566926 CLK4Q9HAZ1 481 aaKnown RBP12.7□□□□□ -0.38
CLK3-218ENST00000566926 KCNK13Q9HB14 408 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 ZBTB26Q9HCK0 441 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 C5AR2Q9P296 337 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 TRPS1Q9UHF7 1281 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
CLK3-218ENST00000566926 A6NL46 340 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 IDSB3KWA1 339 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 SOCS6O14544 535 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 UBFD1O14562 309 aaKnown RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 ZNF195O14628 629 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 DPM1O60762 260 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 CLDN9O95484 217 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 STATHP02808 62 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 SERPINA6P08185 405 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 ACPPP15309 386 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 ALOX12P18054 663 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 IL1RNP18510 177 aa12.69□□□□□ -0.38
CLK3-218ENST00000566926 ARL1P40616 181 aaPredicted RBP12.69□□□□□ -0.38
CLK3-218ENST00000566926 STXBP1P61764 594 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms