RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	FAM159B	A6NKW6	160 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	EFCAB8	A8MWE9	144 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	IDS	B3KWA1	339 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376		F8W8V4	182 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	PHGDH	O43175	533 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	RDH16	O75452	317 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TTC4	O95801	387 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SYF2	O95926	243 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	EIF2S1	P05198	315 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	C8G	P07360	202 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SMIM10L1	P0DMW3	83 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CD8B	P10966	210 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ITGAM	P11215	1152 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	AGXT	P21549	392 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FUT4	P22083	530 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FBL	P22087	321 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	RPA3	P35244	121 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TDGF1P3	P51864	188 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	HNRNPF	P52597	415 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ARSF	P54793	590 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	OLR1	P78380	273 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CHRNE	Q04844	493 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	MGAT5	Q09328	741 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	NAE1	Q13564	534 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TSTA3	Q13630	321 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	E2F2	Q14209	437 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TSN	Q15631	228 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	INPP5J	Q15735	1006 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	MUM1	Q2TAK8	710 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TTLL9	Q3SXZ7	439 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FAM45BP	Q6NSW5	357 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SLC26A11	Q86WA9	606 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ZNF227	Q86WZ6	799 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SPATA6L	Q8N4H0	392 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	GPATCH11	Q8N954	259 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TTC29	Q8NA56	475 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TMEM52	Q8NDY8	209 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	GSDMB	Q8TAX9	411 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ZCCHC10	Q8TBK6	192 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FAM45A	Q8TCE6	357 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CPT1C	Q8TCG5	803 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CALML6	Q8TD86	181 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CREB3L4	Q8TEY5	395 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TSLP	Q969D9	159 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	PNPLA2	Q96AD5	504 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FBXL8	Q96CD0	374 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	LRRC39	Q96DD0	335 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SNRNP40	Q96DI7	357 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	PDLIM5	Q96HC4	596 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	SMIM10	Q96HG1	83 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CABS1	Q96KC9	395 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	IMMP1L	Q96LU5	166 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TSNARE1	Q96NA8	513 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ALPK1	Q96QP1	1244 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TAAR6	Q96RI8	345 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	GPR22	Q99680	433 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ERP44	Q9BS26	406 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CRB3	Q9BUF7	120 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	VN1R1	Q9GZP7	353 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	RHOJ	Q9H4E5	214 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	PARVB	Q9HBI1	364 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ZNF160	Q9HCG1	818 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ZNF304	Q9HCX3	659 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	FAM114A2	Q9NRY5	505 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ABCF3	Q9NUQ8	709 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ASF1B	Q9NVP2	202 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	UTP6	Q9NYH9	597 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	TAS2R13	Q9NYV9	303 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	PADI2	Q9Y2J8	665 aa		6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	MTO1	Q9Y2Z2	717 aa	Known RBP	6.09	□□□□□ -1.43
TCF4-233	ENST00000566376	ANKRD17	O75179	2603 aa	Known RBP	6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	SHISA3	A0PJX4	238 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376		B2RBV5	119 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	SGK494	L7N484	410 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	SHOX	O15266	292 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	SLC16A5	O15375	505 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	ZBTB14	O43829	449 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	KDM1A	O60341	852 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	BMP10	O95393	424 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	NSA2	O95478	260 aa	Known RBP	6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	PRR35	P0CG20	571 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	SLC35E2B	P0CK96	405 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	CD1D	P15813	335 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	HOXC12	P31275	282 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	HNRNPH1	P31943	449 aa	Known RBP	6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	GDF5	P43026	501 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	ABAT	P80404	500 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	IRF9	Q00978	393 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	RHAG	Q02094	409 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	AIMP2	Q13155	320 aa	Known RBP	6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	FAM53B	Q14153	422 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	TUBB8	Q3ZCM7	444 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	GARNL3	Q5VVW2	1013 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	ZNF324B	Q6AW86	544 aa	Predicted RBP	6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	FAAH2	Q6GMR7	532 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	PRMT9	Q6P2P2	845 aa		6.08	□□□□□ -1.44
TCF4-233	ENST00000566376	CYP2R1	Q6VVX0	501 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms