RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CLCN2P51788 898 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 PLA2G16P53816 162 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 ETF1P62495 437 aaKnown RBP18.86■□□□□ 0.61
CLN6-207ENST00000566347 SRSF11Q05519 484 aaKnown RBP18.86■□□□□ 0.61
CLN6-207ENST00000566347 NAB1Q13506 487 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 RUNX2Q13950 521 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 HIST2H2ACQ16777 129 aaPredicted RBP18.86■□□□□ 0.61
CLN6-207ENST00000566347 KBTBD12Q3ZCT8 623 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 HIST2H2AA3Q6FI13 130 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 RAPH1Q70E73 1250 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 LRRC70Q7Z2Q7 622 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 CCDC25Q86WR0 208 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 ZNF595Q8IYB9 648 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 PPM1NQ8N819 430 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 STAG3L4Q8TBR4 150 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 FBXO25Q8TCJ0 367 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 FRMD6Q96NE9 622 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 QRFPRQ96P65 431 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 SERINC2Q96SA4 455 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 TRIM45Q9H8W5 580 aaPredicted RBP18.86■□□□□ 0.61
CLN6-207ENST00000566347 COPS7BQ9H9Q2 264 aaPredicted RBP18.86■□□□□ 0.61
CLN6-207ENST00000566347 PRTFDC1Q9NRG1 225 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 ENTPD4Q9Y227 616 aa18.86■□□□□ 0.61
CLN6-207ENST00000566347 A8MUA0 341 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 SLC19A2O60779 497 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 MYO1DO94832 1006 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 CRABP2P29373 138 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 MAGEA4P43358 317 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 HLCSP50747 726 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 MTTPP55157 894 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 SLC13A2Q13183 592 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 DOC2AQ14183 400 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 SLMAPQ14BN4 828 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 TBCCQ15814 346 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 MAPKAPK3Q16644 382 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 FBXO48Q5FWF7 155 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 ZNF468Q5VIY5 522 aaPredicted RBP18.85■□□□□ 0.61
CLN6-207ENST00000566347 RPTNQ6XPR3 784 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 VN1R5Q7Z5H4 357 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 APCDD1LQ8NCL9 501 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 ESAMQ96AP7 390 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 TMEM125Q96AQ2 219 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 MAGED4Q96JG8 741 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 CD244Q9BZW8 370 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 ROGDIQ9GZN7 287 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 NMRAL1Q9HBL8 299 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 PNO1Q9NRX1 252 aaKnown RBP18.85■□□□□ 0.61
CLN6-207ENST00000566347 NUDT4Q9NZJ9 180 aa18.85■□□□□ 0.61
CLN6-207ENST00000566347 ZNF490Q9ULM2 529 aaPredicted RBP18.85■□□□□ 0.61
CLN6-207ENST00000566347 PPIEQ9UNP9 301 aaKnown RBP18.85■□□□□ 0.61
CLN6-207ENST00000566347 TRBV11-1A0A0K0K1C0 115 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 NME2P1O60361 137 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 CCNT2O60583 730 aaKnown RBP18.84■□□□□ 0.61
CLN6-207ENST00000566347 PRAMEF4O60810 478 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 TBX6O95947 436 aaPredicted RBP18.84■□□□□ 0.61
CLN6-207ENST00000566347 NME2P22392 152 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 IRF8Q02556 426 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 ART3Q13508 389 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 PRAMEF9Q5VWM5 478 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 ABHD17CQ6PCB6 329 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.84■□□□□ 0.61
CLN6-207ENST00000566347 TBC1D1Q86TI0 1168 aaPredicted RBP18.84■□□□□ 0.61
CLN6-207ENST00000566347 SRFBP1Q8NEF9 429 aaKnown RBP18.84■□□□□ 0.61
CLN6-207ENST00000566347 EXT2Q93063 718 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 UBE2E3Q969T4 207 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 VMP1Q96GC9 406 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 CCDC120Q96HB5 630 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 ALG9Q9H6U8 611 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 ADAP2Q9NPF8 381 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 DAPP1Q9UN19 280 aa18.84■□□□□ 0.61
CLN6-207ENST00000566347 MYO9AB2RTY4 2548 aa18.83■□□□□ 0.61
CLN6-207ENST00000566347 PRSS44E7EML9 344 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 NPIPA5E9PKD4 350 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 HNRNPRO43390 633 aaKnown RBP18.83■□□□□ 0.6
CLN6-207ENST00000566347 SLC35E2BP0CK96 405 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 TFEBP19484 476 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 CERS1P27544 350 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 CASP2P42575 452 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 KCNC1P48547 511 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 LIM2P55344 173 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 CHIT1Q13231 466 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 EFTUD2Q15029 972 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN6-207ENST00000566347 ZDHHC24Q6UX98 284 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 SYT10Q6XYQ8 523 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 ZNF572Q7Z3I7 529 aaPredicted RBP18.83■□□□□ 0.6
CLN6-207ENST00000566347 CCDC91Q7Z6B0 441 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 ISCA2Q86U28 154 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 ZNF808Q8N4W9 903 aaPredicted RBP18.83■□□□□ 0.6
CLN6-207ENST00000566347 FAM47BQ8NA70 645 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 FBF1Q8TES7 1133 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 ITLN2Q8WWU7 325 aaPredicted RBP18.83■□□□□ 0.6
CLN6-207ENST00000566347 KCNC2Q96PR1 638 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 CCDC77Q9BR77 488 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 SH3BGRL2Q9UJC5 107 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 FBXW2Q9UKT8 454 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 NPIPA1Q9UND3 350 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 ZNF835Q9Y2P0 537 aa18.83■□□□□ 0.6
CLN6-207ENST00000566347 KLF2Q9Y5W3 355 aaPredicted RBP18.83■□□□□ 0.6
CLN6-207ENST00000566347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN6-207ENST00000566347 CYR61O00622 381 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms