RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RBBP6Q7Z6E9 1792 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 ARL5CA6NH57 179 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CXCR6O00574 342 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CD19P15391 556 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HLA-FP30511 346 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MAT2AP31153 395 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 C1QTNF8P60827 252 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 B4GALNT1Q00973 533 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ILF3Q12906 894 aaKnown RBP eCLIP2.81□□□□□ -1.966e-9■■■■□ 23.8
CHD9-218ENST00000566029 DGKZQ13574 1117 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KIAA0040Q15053 153 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SPANXN2Q5MJ10 180 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CES3Q6UWW8 571 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 LRRC8DQ7L1W4 858 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 COMMD2Q86X83 199 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 EIF4E3Q8N5X7 224 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZBED6CLQ96FA7 236 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZNF670Q9BS34 389 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TRMOQ9BU70 441 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 C1orf109Q9NX04 203 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 A8MXK9 166 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SIGLEC6O43699 453 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SEC22BO75396 215 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 BEST1O76090 585 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PPP2R1BP30154 601 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 STARP49675 285 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GZMMP51124 257 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 DIO3P55073 304 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 RPP30P78346 268 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 OTUD1Q5VV17 481 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 LARP4Q71RC2 724 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD9-218ENST00000566029 RD3Q7Z3Z2 195 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HSD17B13Q7Z5P4 300 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 LDB1Q86U70 411 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 TSPYL5Q86VY4 417 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 OR11H4Q8NGC9 324 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 OR5T2Q8NGG2 359 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KCTD13Q8WZ19 329 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 UBE2E3Q969T4 207 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 C12orf57Q99622 126 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MCOLN1Q9GZU1 580 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SRA1Q9HD15 236 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 RHCGQ9UBD6 479 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TNRC6CQ9HCJ0 1690 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 CXorf51AA0A1B0GTR3 108 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 POM121CA8CG34 1229 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 C15orf62A8K5M9 175 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GMDSO60547 372 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ODC1P11926 461 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MYL12AP19105 171 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PAICSP22234 425 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 PTAFRP25105 342 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ALDH3B1P43353 468 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GLRBP48167 497 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TGFB2P61812 414 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MAD2L1Q13257 205 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 SV2CQ496J9 727 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TCEAL6Q6IPX3 200 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 RGS7BPQ6MZT1 257 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 SLC36A4Q6YBV0 504 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CATSPERGQ6ZRH7 1159 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 COLGALT1Q8NBJ5 622 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MITD1Q8WV92 249 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SENP8Q96LD8 212 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 LRFN5Q96NI6 719 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 RBM4BQ9BQ04 359 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 RBM4Q9BWF3 364 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 SH3BP4Q9P0V3 963 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GABRQQ9UN88 632 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 STUB1Q9UNE7 303 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PCDHGA2Q9Y5H1 932 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KRBOX1C9JBD0 128 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GATCO43716 136 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 PQBP1O60828 265 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 LHCGRP22888 699 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ADRA1BP35368 520 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CD79BP40259 229 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 DGKQP52824 942 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GPR176Q14439 515 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KCNA10Q16322 511 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 VPS26BQ4G0F5 336 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PAN3Q58A45 887 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 OTUD3Q5T2D3 398 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 TEX261Q6UWH6 196 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SPATA19Q7Z5L4 167 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 CFAP206Q8IYR0 622 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 IZUMO1Q8IYV9 350 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 OR4D10Q8NGI6 311 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ABHD5Q8WTS1 349 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NINJ1Q92982 152 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZPBPQ9BS86 351 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MRIQ9BWK5 157 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GAREM1Q9H706 876 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ZFP64Q9NPA5 681 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 PIM2Q9P1W9 311 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 U3KQ87 197 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SSC5DA1L4H1 1573 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 A0A087X1B8 175 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 MDM4O15151 490 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NDUFS6O75380 124 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms