RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CTAGE15A4D2H0 777 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 SAGE2PA6NJ88 616 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF839A8K0R7 811 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 EEF1E1O43324 174 aaKnown RBP8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CD5LO43866 347 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 APRTP07741 180 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 FHP07954 510 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CTAGE8P0CG41 777 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 MLNP12872 115 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 ETS1P14921 441 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 IL1RNP18510 177 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 HRH2P25021 359 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CTSSP25774 331 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 DR1Q01658 176 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 GPS1Q13098 491 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 ARHGAP19Q14CB8 494 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 WIPI1Q5MNZ9 446 aaPredicted RBP8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 ICE2Q659A1 982 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 PPP1R21Q6ZMI0 780 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 PLEKHM3Q6ZWE6 761 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 PRSS41Q7RTY9 318 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CTAGE6Q86UF2 777 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CTAGE4Q8IX94 777 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 SHISA5Q8N114 240 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 MMGT1Q8N4V1 131 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CAMKVQ8NCB2 501 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 NAXEQ8NCW5 288 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 OR9A1PQ8NGU1 263 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 ASB15Q8WXK1 588 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 PEX13Q92968 403 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 TBC1D20Q96BZ9 403 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 HSPBAP1Q96EW2 488 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 KRT12Q99456 494 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 RAB17Q9H0T7 212 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 SAMD15Q9P1V8 674 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 RIMKLBQ9ULI2 386 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 NAALAD2Q9Y3Q0 740 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 NFS1Q9Y697 457 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 CUBNO60494 3623 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 TRBV11-1A0A0K0K1C0 115 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 IQCF5A8MTL0 148 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 A8MUA0 341 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 A8MV72 311 aaPredicted RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 HAT1O14929 419 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 RDH16O75452 317 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ZFAND5O76080 213 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SIX3O95343 332 aaPredicted RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 IL18BPO95998 194 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 CELA3AP09093 270 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 NID1P14543 1247 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 PAX1P15863 534 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 THBS2P35442 1172 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 BDKRB1P46663 353 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF136P52737 540 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ADARP55265 1226 aaKnown RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 RPS15AP62244 130 aaKnown RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SKP1P63208 163 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 BASP1P80723 227 aaKnown RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 CAV1Q03135 178 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 MORF4L2Q15014 288 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF750Q32MQ0 723 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SLC26A11Q86WA9 606 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 PLD3Q8IV08 490 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 PPIL6Q8IXY8 311 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 LIX1Q8N485 282 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 B3GNT7Q8NFL0 401 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 PPP1R14CQ8TAE6 165 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SGCZQ96LD1 299 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 GORASP1Q9BQQ3 440 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 RBM24Q9BX46 236 aaKnown RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 RBCK1Q9BYM8 510 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM129AQ9BZQ8 928 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 XAB2Q9HCS7 855 aaKnown RBP8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 TMEM184CQ9NVA4 438 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 BFARQ9NZS9 450 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 JKAMPQ9P055 326 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SPRR3Q9UBC9 169 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 ASIC3Q9UHC3 531 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 TAC3Q9UHF0 121 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 CDC42EP3Q9UKI2 254 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 SLC22A7Q9Y694 548 aa8.36□□□□□ -1.07
VPS9D1-205ENST00000565452 A0A087X1B8 175 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 CCDC162PA2VCL2 907 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 OR51F1A6NGY5 319 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 G3V3Y1 287 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 H7BY64 318 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 DNALI1O14645 258 aaPredicted RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 B4GALT2O60909 372 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 TMCC2O75069 709 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ERN1O75460 977 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 OR2J2O76002 312 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms