RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 LRRC70Q7Z2Q7 622 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 RPS19BP1Q86WX3 136 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF227Q86WZ6 799 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 APCDD1LQ8NCL9 501 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ARMC2Q8NEN0 867 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 OR2L5Q8NG80 312 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 STAG3L4Q8TBR4 150 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 RELTQ969Z4 430 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 PTCD3Q96EY7 689 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 SEC16BQ96JE7 1060 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 FAR2Q96K12 515 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 FRMD6Q96NE9 622 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 F2RL3Q96RI0 385 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ATOH8Q96SQ7 321 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 LRRC1Q9BTT6 524 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 NPLQ9BXD5 320 aaPredicted RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 TSPAN10Q9H1Z9 355 aaPredicted RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ZDHHC18Q9NUE0 388 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 SEC14L3Q9UDX4 400 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF223Q9UK11 482 aaPredicted RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 MMACHCQ9Y4U1 282 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 PCDHGB6Q9Y5F9 930 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 MYO7BQ6PIF6 2116 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 A0A088AWK7 358 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TRBV11-1A0A0K0K1C0 115 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 A0A1B0GUH1 482 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 HMX2A2RU54 273 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 ASPDHA6ND91 283 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 UBXN8O00124 270 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CYR61O00622 381 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 KERAO60938 352 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 SLC25A12O75746 678 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 MYO1DO94832 1006 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 S100BP04271 92 aaPredicted RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 SP1P08047 785 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 LTA4HP09960 611 aaKnown RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 MTHFD2P13995 350 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CD46P15529 392 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF10P21506 573 aaPredicted RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CRABP2P29373 138 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 EEF1DP29692 281 aaKnown RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 MTTPP55157 894 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 LIM2P55344 173 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 HSD17B7P56937 341 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 IRF8Q02556 426 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 SLC13A2Q13183 592 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CHIT1Q13231 466 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TERF2Q15554 542 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TBCCQ15814 346 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF793Q6ZN11 406 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 UBE3DQ7Z6J8 389 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CLNKQ7Z7G1 428 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 ARMC10Q8N2F6 343 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 UBTD2Q8WUN7 234 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 KCTD4Q8WVF5 259 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 NXNL1Q96CM4 212 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 SERINC2Q96SA4 455 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 EFCAB11Q9BUY7 163 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CD244Q9BZW8 370 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 TRIM45Q9H8W5 580 aaPredicted RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 NMRAL1Q9HBL8 299 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 PRDM7Q9NQW5 492 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 PRTFDC1Q9NRG1 225 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 PNO1Q9NRX1 252 aaKnown RBP9.37□□□□□ -0.91
CMTM3-209ENST00000565003 NUDT4Q9NZJ9 180 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 LRFN1Q9P244 771 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 SH3BGRL2Q9UJC5 107 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 DAPP1Q9UN19 280 aa9.37□□□□□ -0.91
CMTM3-209ENST00000565003 CACNA1DQ01668 2161 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 MYOCOSA0A1B0GUC4 107 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 NPIPA5E9PKD4 350 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 K7EPI3 171 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 RTCAO00442 366 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CLDN4O14493 209 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 PRKNO60260 465 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 NME2P1O60361 137 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 NME2P22392 152 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 TRHRP34981 398 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CASP2P42575 452 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CA7P43166 264 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 MSH2P43246 934 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CYB561P49447 251 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 HLCSP50747 726 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CLCN2P51788 898 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 GPR143P51810 404 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 ALDH6A1Q02252 535 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
CMTM3-209ENST00000565003 LAPTM5Q13571 262 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 MAPKAPK3Q16644 382 aa9.36□□□□□ -0.91
CMTM3-209ENST00000565003 PAGE2BQ5JRK9 111 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms