RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CLDN4O14493 209 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 SIX3O95343 332 aaPredicted RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 TBX6O95947 436 aaPredicted RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 TGFB1P01137 390 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 MAOAP21397 527 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 ARL1P40616 181 aaPredicted RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 RAB38P57729 211 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 RCN2Q14257 317 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 SLC29A2Q14542 456 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 TMEM35AQ53FP2 167 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 GOLGA7Q7Z5G4 137 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 AMER2Q8N7J2 671 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 PTGR2Q8N8N7 351 aaPredicted RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 EIF1ADQ8N9N8 165 aaKnown RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 CATSPER1Q8NEC5 780 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 ADAMTS18Q8TE60 1221 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 HAS2Q92819 552 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 ATP6V1E2Q96A05 226 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 C19orf60Q96EN9 201 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 CMTM7Q96FZ5 175 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 KCNC2Q96PR1 638 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 MS4A8Q9BY19 250 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 L2HGDHQ9H9P8 463 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 MMP25Q9NPA2 562 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 PRDM7Q9NQW5 492 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 PLA2G3Q9NZ20 509 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 XPR1Q9UBH6 696 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 MRPS33Q9Y291 106 aaKnown RBP17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 MMACHCQ9Y4U1 282 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 PCDHGA10Q9Y5H3 936 aa17.23■□□□□ 0.35
SYNGR3-204ENST00000564642 IQANK1A0A1B0GTG1 560 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 E2F3O00716 465 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 UGDHO60701 494 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 SH3BGRLO75368 114 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 GCAP28676 217 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 EEF1DP29692 281 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 SLC26A5P58743 744 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 PHEXP78562 749 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 ZNF33BQ06732 778 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 DDX39BQ13838 428 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 AP5B1Q2VPB7 878 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 TIFABQ6ZNK6 161 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 GSPT2Q8IYD1 628 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 OR1N1Q8NGS0 311 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 REPS1Q96D71 796 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 ZNF354BQ96LW1 612 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 MRPL57Q9BQC6 102 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 TBCDQ9BTW9 1192 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 TXLNGYQ9BZA5 131 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 MRPL46Q9H2W6 279 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 NECTIN3Q9NQS3 549 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 PRTFDC1Q9NRG1 225 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 ASF1BQ9NVP2 202 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 DAPP1Q9UN19 280 aa17.22■□□□□ 0.35
SYNGR3-204ENST00000564642 TCRBV16S1A1N1A0A5B0 115 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 STX16-NPEPL1H3BU86 382 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 STX16O14662 325 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 WDPCPO95876 746 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 MYBL2P10244 700 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 GNLYP22749 145 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 CERS1P27544 350 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 TSFMP43897 325 aaKnown RBP17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 LIM2P55344 173 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 HSD17B7P56937 341 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 TAS2R50P59544 299 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 SRSF1Q07955 248 aaKnown RBP eCLIP17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 SLC13A2Q13183 592 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 CPSF6Q16630 551 aaKnown RBP eCLIP17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 H3F3CQ6NXT2 135 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 CNPY4Q8N129 248 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 FAM47BQ8NA70 645 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 HUS1BQ8NHY5 278 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 SUN3Q8TAQ9 357 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 CENPKQ9BS16 269 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 NOL11Q9H8H0 719 aaKnown RBP17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 AGPAT4Q9NRZ5 378 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 ABI3Q9P2A4 366 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
SYNGR3-204ENST00000564642 SHANK1Q9Y566 2161 aa17.21■□□□□ 0.34
SYNGR3-204ENST00000564642 IGKV3D-11A0A0A0MRZ8 115 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 TRAV17A0A0B4J275 112 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 A8MUA0 341 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 H0YIV9 168 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 SAP18O00422 153 aaKnown RBP17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 F10P00742 488 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 ATP5A1P25705 553 aaKnown RBP17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 PIK3CBP42338 1070 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 MEP1AQ16819 746 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 ACER2Q5QJU3 275 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 DEPDC1Q5TB30 811 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 KHDRBS2Q5VWX1 349 aaKnown RBP17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 FCRLBQ6BAA4 426 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 UBE3DQ7Z6J8 389 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 ZNF595Q8IYB9 648 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 SLC5A8Q8N695 610 aa17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 UBLCP1Q8WVY7 318 aaPredicted RBP17.2■□□□□ 0.34
SYNGR3-204ENST00000564642 MTERF1Q99551 399 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms