RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 BLOC1S3Q6QNY0 202 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 KYQ8NBH2 561 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ABHD11Q8NFV4 315 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 DNASE2BQ8WZ79 361 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 APIPQ96GX9 242 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 NPAS2Q99743 824 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 DUSP15Q9H1R2 295 aaPredicted RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 ACTL8Q9H568 366 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 CPNE5Q9HCH3 593 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ASIC5Q9NY37 505 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 VPS29Q9UBQ0 182 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 APOBEC3BQ9UH17 382 aaKnown RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 TAF4O00268 1085 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ANKRD28O15084 1053 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ZW10O43264 779 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PRICKLE3O43900 615 aaPredicted RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 NRP2O60462 931 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 CSF2P04141 144 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 ITIH1P19827 911 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PRDX1Q06830 199 aaKnown RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 C10orf62Q5T681 223 aaPredicted RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 GRPEL2Q8TAA5 225 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 LCN9Q8WX39 176 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PATE1Q8WXA2 126 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 JPH3Q8WXH2 748 aaPredicted RBP16.92■□□□□ 0.3
GDE1-203ENST00000564172 SLC29A1Q99808 456 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 LRRC61Q9BV99 259 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PELI2Q9HAT8 420 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 HMG20AQ9NP66 347 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PCDHB11Q9Y5F2 797 aa16.92■□□□□ 0.3
GDE1-203ENST00000564172 PLXND1Q9Y4D7 1925 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 A8MU76 341 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 H7BY64 318 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 NR5A2O00482 541 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 NTRK1P04629 796 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 XRCC1P18887 633 aaPredicted RBP16.91■□□□□ 0.3
GDE1-203ENST00000564172 CD247P20963 164 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 HPCAL1P37235 193 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 ZFP36L2P47974 494 aaKnown RBP16.91■□□□□ 0.3
GDE1-203ENST00000564172 NFATC3Q12968 1075 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 STK11Q15831 433 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 DUSP7Q16829 419 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 TMIGD1Q6UXZ0 262 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 AMIGO1Q86WK6 493 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 SAMD14Q8IZD0 417 aaPredicted RBP16.91■□□□□ 0.3
GDE1-203ENST00000564172 DEFB107AQ8IZN7 70 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 DSELQ8IZU8 1212 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 ANKRD53Q8N9V6 530 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 OR4E2Q8NGC2 313 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 UBE2E3Q969T4 207 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 CEP19Q96LK0 163 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 ZNF597Q96LX8 424 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 PRAP1Q96NZ9 151 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 SLC52A3Q9NQ40 469 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 C8orf4Q9NR00 106 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 TMEM45AQ9NWC5 275 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 OR6C2Q9NZP2 312 aa16.91■□□□□ 0.3
GDE1-203ENST00000564172 ASNA1O43681 348 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 DYRK3O43781 588 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 ETHE1O95571 254 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 NME1P15531 152 aaKnown RBP16.9■□□□□ 0.3
GDE1-203ENST00000564172 AMD1P17707 334 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 CAPN3P20807 821 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 IL12AP29459 219 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 SHMT2P34897 504 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 CBX5P45973 191 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 FNTBP49356 437 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 ART3Q13508 389 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 RCAN2Q14206 197 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 PTGR1Q14914 329 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 VPS26BQ4G0F5 336 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 REP15Q6BDI9 236 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 GALNT18Q6P9A2 607 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 KCTD20Q7Z5Y7 419 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 SFTPA2Q8IWL1 248 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 NAGSQ8N159 534 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 LIX1Q8N485 282 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 Q8N9G6 341 aaPredicted RBP16.9■□□□□ 0.3
GDE1-203ENST00000564172 OR4K1Q8NGD4 311 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 TSPEARQ8WU66 669 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 SP140LQ9H930 580 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 DLGAP4Q9Y2H0 992 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 FANCMQ8IYD8 2048 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 TECTAO75443 2155 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 EML5Q05BV3 1969 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 A0A1B0GTW7 788 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 OR5K3A6NET4 321 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 OR5K4A6NMS3 321 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 FOXE1O00358 373 aaPredicted RBP16.9■□□□□ 0.3
GDE1-203ENST00000564172 BCKDHAP12694 445 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 PEBP1P30086 187 aaKnown RBP16.9■□□□□ 0.3
GDE1-203ENST00000564172 RRM2P31350 389 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 CCR8P51685 355 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 RPS13P62277 151 aaKnown RBP16.9■□□□□ 0.3
GDE1-203ENST00000564172 KRT78Q8N1N4 520 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 APOLD1Q96LR9 279 aa16.9■□□□□ 0.3
GDE1-203ENST00000564172 ATP13A2Q9NQ11 1180 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms