RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 HPP00738 406 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CELA2AP08217 269 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CYC1P08574 325 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 C8orf89P0DMQ9 161 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MYL2P10916 166 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 RNH1P13489 461 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 CPA3P15088 417 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ACPPP15309 386 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ATP5A1P25705 553 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 BSGP35613 385 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 RRADP55042 308 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MTTPP55157 894 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 LIM2P55344 173 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 DNAJB13P59910 316 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 EEF1A2Q05639 463 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 DDX39BQ13838 428 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 PCLAFQ15004 111 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TUBB8Q3ZCM7 444 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CCDC153Q494R4 210 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MINDY4Q4G0A6 757 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TMEM35AQ53FP2 167 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TCHHL1Q5QJ38 904 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 FRG2Q64ET8 278 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TCTN3Q6NUS6 607 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TRIM40Q6P9F5 258 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 NDUFAF7Q7L592 441 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MILR1Q7Z6M3 343 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ANKRD37Q7Z713 158 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SLC22A9Q8IVM8 553 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SRRM1Q8IYB3 904 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 ACOT4Q8N9L9 421 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 C9orf43Q8TAL5 461 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 RDH11Q8TC12 318 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ATP6V1E2Q96A05 226 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MTFMTQ96DP5 389 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 APOPT1Q96IL0 206 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 FAR2Q96K12 515 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 FER1L6-AS2Q96M78 137 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 KCNC2Q96PR1 638 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 FRG2BQ96QU4 278 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SERINC2Q96SA4 455 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ZNF382Q96SR6 550 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CSF3RQ99062 836 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 MAPKAP1Q9BPZ7 522 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TBCDQ9BTW9 1192 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 NPLQ9BXD5 320 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 SLC25A18Q9H1K4 315 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ZNF160Q9HCG1 818 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TNFRSF12AQ9NP84 129 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 NECTIN3Q9NQS3 549 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 ZNF71Q9NQZ8 489 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 FARSBQ9NSD9 589 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 OXSMQ9NWU1 459 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SLC17A7Q9P2U7 560 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 PPT2Q9UMR5 302 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 DAPP1Q9UN19 280 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TP53TG5Q9Y2B4 290 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 PCDHGA9Q9Y5G4 932 aaKnown RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 PRRC2CQ9Y520 2896 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 CCDC151A5D8V7 595 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MKRN2OSH3BPM6 223 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MANBAO00462 879 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 PCDH17O14917 1159 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 B3GALT2O43825 422 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 EEDO75530 441 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 PDYNP01213 254 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 SFTPCP11686 197 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MAOAP21397 527 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 HIST1H1TP22492 207 aaPredicted RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 PTX3P26022 381 aaPredicted RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 ETV4P43268 484 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 ARFIP1P53367 373 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 NAGLUP54802 743 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 RAB38P57729 211 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 SKP1P63208 163 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 LCP2Q13094 533 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 CUL3Q13618 768 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 RAPSNQ13702 412 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MPP2Q14168 576 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MYBPC3Q14896 1274 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 KRT71Q3SY84 523 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 OR4C11Q6IEV9 310 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MRM1Q6IN84 353 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 ATG14Q6ZNE5 492 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 QSOX2Q6ZRP7 698 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 FRMD7Q6ZUT3 714 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 CPEB2Q7Z5Q1 589 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 C10orf107Q8IVU9 208 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 SCUBE1Q8IWY4 988 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 PARP9Q8IXQ6 854 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 GALNT16Q8N428 558 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 CDYL2Q8N8U2 506 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 SRFBP1Q8NEF9 429 aaKnown RBP8.03□□□□□ -1.12
UBR1-204ENST00000563239 ARMC2Q8NEN0 867 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 MYRIPQ8NFW9 859 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 TCP10LQ8TDR4 215 aa8.03□□□□□ -1.12
UBR1-204ENST00000563239 AGAP11Q8TF27 550 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms