RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GLRA3O75311 464 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 GRAP2O75791 330 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 KRT33AO76009 404 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 PROS1P07225 676 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ODC1P11926 461 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 KRT5P13647 590 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF18P17022 549 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 CEBPBP17676 345 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 RBMS1P29558 406 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MARCKSP29966 332 aaPredicted RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MAP2K2P36507 400 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TNFSF10P50591 281 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 GPC3P51654 580 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF131P52739 623 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC26A5P58743 744 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 HERV-K104P63124 156 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 RPP38P78345 283 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MYL7Q01449 175 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ITGA9Q13797 1035 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM132DQ14C87 1099 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 STXBP2Q15833 593 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 EPC2Q52LR7 807 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ADAM5Q6NVV9 412 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF790Q6PG37 636 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM64Q6YI46 380 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM26Q6ZUK4 368 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 BNIPLQ7Z465 357 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 CPEB2Q7Z5Q1 589 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 GPR141Q7Z602 305 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TAF8Q7Z7C8 310 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 RCOR2Q8IZ40 523 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 FBXW8Q8N3Y1 598 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MRPL43Q8N983 215 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 GPRC5AQ8NFJ5 357 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 GPR148Q8TDV2 347 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 CHURC1Q8WUH1 139 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 EEF2KMTQ96G04 330 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF274Q96GC6 653 aaPredicted RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ASCL2Q99929 193 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 SIRPDQ9H106 197 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 EGLN3Q9H6Z9 239 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 ATP13A3Q9H7F0 1226 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 TBC1D13Q9NVG8 400 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 INTS10Q9NVR2 710 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 CGNQ9P2M7 1197 aaKnown RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 POLKQ9UBT6 870 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 EPHA6Q9UF33 1036 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 MAN1B1Q9UKM7 699 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 DNPEPQ9ULA0 475 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 CCPG1Q9ULG6 757 aa2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 FOXA2Q9Y261 457 aaPredicted RBP2.85□□□□□ -1.95
SHCBP1-202ENST00000563219 A0A087WW49 117 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 NR5A2O00482 541 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 RASGRF2O14827 1237 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 ADAM12O43184 909 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 ECE2O60344 883 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CDC123O75794 336 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CDK2AP2O75956 126 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 OR6B1O95007 311 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 DIRAS3O95661 229 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 IGLV1-44P01699 117 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 VTNP04004 478 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 RAF1P04049 648 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CD59P13987 128 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 NCF1P14598 390 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC1A3P43003 542 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 NSFP46459 744 aaKnown RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 GEMP55040 296 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 NLRP11P59045 1033 aaKnown RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 HTD2P86397 168 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CEACAM7Q14002 265 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 TRIM29Q14134 588 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 BTG3Q14201 252 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 PTPN14Q15678 1187 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 HSP90AA5PQ58FG0 334 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 FFAR4Q5NUL3 377 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 IRGCQ6NXR0 463 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC27A4Q6P1M0 643 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 UNC5DQ6UXZ4 953 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 Q71RC1 249 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 G2E3Q7L622 706 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 COX8CQ7Z4L0 72 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 LSMEM2Q8N112 164 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 PRSS35Q8N3Z0 413 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 WDSUB1Q8N9V3 476 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 RELL2Q8NC24 303 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 LEMD2Q8NC56 503 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CCDC197Q8NCU1 140 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CNNM3Q8NE01 707 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 DDHD1Q8NEL9 900 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 OR5AP2Q8NGF4 316 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 OR13C5Q8NGS8 318 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 CCDC110Q8TBZ0 833 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SELENOMQ8WWX9 145 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SMPDL3AQ92484 453 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SUSD6Q92537 303 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 MRPL53Q96EL3 112 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms