RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 WNT3P56703 355 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 ACTR3P61158 418 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 TRAP1Q12931 704 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 MRM1Q6IN84 353 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 FRMPD2BQ6IN97 320 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 NANOGP8Q6NSW7 305 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 RIPOR1Q6ZS17 1223 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PRSS42Q7Z5A4 293 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 KMT5CQ86Y97 462 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SLC15A3Q8IY34 581 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 KIAA2013Q8IYS2 634 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 DNAJC22Q8N4W6 341 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 OR8K5Q8NH50 307 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 STMN2Q93045 179 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 ASB9Q96DX5 294 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PANX1Q96RD7 426 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PAIP1Q9H074 479 aaKnown RBP13.57□□□□□ -0.24
COMMD4-205ENST00000562310 NANOGQ9H9S0 305 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PDE7BQ9NP56 450 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 FSCN3Q9NQT6 498 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PRDM9Q9NQV7 894 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SOHLH2Q9NX45 425 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 CD300AQ9UGN4 299 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 GMEB2Q9UKD1 530 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 PLCL2Q9UPR0 1127 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 POMPQ9Y244 141 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 CABIN1Q9Y6J0 2220 aa13.57□□□□□ -0.24
COMMD4-205ENST00000562310 ARID1BQ8NFD5 2236 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 LOC105369274A0A096LPK9 316 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 LOC102723532A0A0G2JNH3 316 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 A8MUI8 341 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 C4orf51C9J302 202 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TOX3O15405 576 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 B3GALT2O43825 422 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ANP32DO95626 131 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ZCCHC18P0CG32 403 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 SMIM10L1P0DMW3 83 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 HOXB9P17482 250 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ALOX12P18054 663 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 PPIBP23284 216 aaKnown RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 CERS1P27544 350 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 VSX2P58304 361 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 RAB8AP61006 207 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 BTN3A2P78410 334 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 SLAMF1Q13291 335 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 CLPPQ16740 277 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TCTE1Q5JU00 501 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ANKRD26P1Q6NSI1 321 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TMEM214Q6NUQ4 689 aaKnown RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 DNAJC14Q6Y2X3 702 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 MCATQ8IVS2 390 aaKnown RBP13.56□□□□□ -0.24
COMMD4-205ENST00000562310 OR4N4Q8N0Y3 316 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 FAM47BQ8NA70 645 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 KCT2Q8NC54 265 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ZCCHC10Q8TBK6 192 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 DNAJB14Q8TBM8 379 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 NUDT8Q8WV74 236 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 SMIM10Q96HG1 83 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF285Q96NJ3 590 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 MACROD1Q9BQ69 325 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TRIM15Q9C019 465 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 TAS2R7Q9NYW3 318 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 SEMA5BQ9P283 1151 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 VPS4AQ9UN37 437 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 ASB4Q9Y574 426 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 PCDHGB2Q9Y5G2 931 aa13.56□□□□□ -0.24
COMMD4-205ENST00000562310 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 A0A0G2JN53 185 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 C1orf226A1L170 272 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 EME2A4GXA9 379 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NVLO15381 856 aaKnown RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PDPK1O15530 556 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 B4GAT1O43505 415 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ENGP17813 658 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 CD1CP29017 333 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PTPN6P29350 595 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ARL4DP49703 201 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ATXN3P54252 364 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 EMP3P54852 163 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 MC1RQ01726 317 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 FLOT2Q14254 428 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 TRIM25Q14258 630 aaKnown RBP13.55□□□□□ -0.24
COMMD4-205ENST00000562310 LPAL2Q16609 132 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 NDUFA9Q16795 377 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 PRTGQ2VWP7 1150 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 AMZ1Q400G9 498 aa13.55□□□□□ -0.24
COMMD4-205ENST00000562310 ZNF385BQ569K4 471 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms