RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FAM46DQ8NEK8 389 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 OR7G3Q8NG95 312 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 FOXJ1Q92949 421 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 LYSMD1Q96S90 227 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 TAPBPLQ9BX59 468 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 BRF2Q9HAW0 419 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 PAQR5Q9NXK6 330 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 TMPRSS11EQ9UL52 423 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 V9GYH0 126 aa13.38□□□□□ -0.27
VPS9D1-202ENST00000561976 IGLV3-16A0A075B6K0 115 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 OR2AG2A6NM03 316 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ZAR1LA6NP61 321 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 A8MVJ9 347 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ARHGEF33A8MVX0 844 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FAM227AF5H4B4 570 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 IL7P13232 177 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CBLP22681 906 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CSNK1DP48730 415 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ALDH9A1P49189 494 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 TGM4P49221 684 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 RBBP4Q09028 425 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 LEXMQ3ZCV2 418 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 TRAF7Q6Q0C0 670 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CAMKMTQ7Z624 323 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 NLRP8Q86W28 1048 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CACTIN-AS1Q8N1I8 211 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ASZ1Q8WWH4 475 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CIDECQ96AQ7 238 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ARHGAP39Q9C0H5 1083 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ASAH2Q9NR71 780 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CLEC4EQ9ULY5 219 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 A0A1W2PQ09 198 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 TLR4O00206 839 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 KPNA5O15131 536 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CSTF2P33240 577 aaKnown RBP eCLIP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FLT3LGP49771 235 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SNRPD1P62314 119 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 MC1RQ01726 317 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FCHO2Q0JRZ9 810 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 LMAN2Q12907 356 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SPHARQ15513 63 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CCSAPQ6IQ19 270 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 PKP4Q99569 1192 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 BHLHE41Q9C0J9 482 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 RERGLQ9H628 205 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 REEP4Q9H6H4 257 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 WWP2O00308 870 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ZNF821O75541 412 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SOX14O95416 240 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 IFNW1P05000 195 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 C1SP09871 688 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SCN1BQ07699 218 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 KCNC3Q14003 757 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 ZNF79Q15937 498 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 OXR1Q8N573 874 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 KLHL6Q8WZ60 621 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 METTL2AQ96IZ6 378 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 POLR2J2Q9GZM3 115 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 PLSCR3Q9NRY6 295 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 C1GALT1Q9NS00 363 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 STOX2Q9P2F5 926 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 SEC14L4Q9UDX3 406 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 EXO1Q9UQ84 846 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
VPS9D1-202ENST00000561976 CCDC182A6NF36 153 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 SCO2O43819 266 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 CSO75390 466 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 CD70P32970 193 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 SPINT3P49223 89 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 RHAGQ02094 409 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 CLPPQ16740 277 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 SLC5A12Q1EHB4 618 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 SYTL3Q4VX76 610 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 OTOP2Q7RTS6 562 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 TMPRSS11BQ86T26 416 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 OR9Q1Q8NGQ5 310 aa13.36□□□□□ -0.27
VPS9D1-202ENST00000561976 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms