RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 FGF21Q9NSA1 209 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CHCHD3Q9NX63 227 aaKnown RBP3.41□□□□□ -1.86
HERC1-215ENST00000561436 FLRT3Q9NZU0 649 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 MAD2L2Q9UI95 211 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 DAPK2Q9UIK4 370 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 LEF1Q9UJU2 399 aaPredicted RBP3.41□□□□□ -1.86
HERC1-215ENST00000561436 ITGA11Q9UKX5 1188 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 TMED3Q9Y3Q3 217 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 UBIAD1Q9Y5Z9 338 aa3.41□□□□□ -1.86
HERC1-215ENST00000561436 CHD8Q9HCK8 2581 aa3.4□□□□□ -1.86
HERC1-215ENST00000561436 TRAV24A0A0B4J272 114 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 GSTTP1A0A1W2PQM5 241 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 OOEPA6NGQ2 149 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 C2orf81A6NN90 581 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 C2CD4DB7Z1M9 353 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ANHXE9PGG2 379 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ARPC2O15144 300 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 MGAMO43451 1857 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 XPNPEP2O43895 674 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 CXCL14O95715 111 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 RLN1P04808 185 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 FAM58BPP0C7Q3 252 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 GOLGA8HP0CJ92 632 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 IGHV4-38-2P0DP08 117 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 LIFP15018 202 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 CYP11B2P19099 503 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 EFNA1P20827 205 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 RPS9P46781 194 aaKnown RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 HERV-K104P61576 105 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 KCNJ10P78508 379 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ZNF718Q3SXZ3 478 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 NHSL2Q5HYW2 709 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 MPP7Q5T2T1 576 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 TRMT1LQ7Z2T5 733 aaKnown RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 GLRX5Q86SX6 157 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 TMEM139Q8IV31 216 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ZNF713Q8N859 430 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 CNNM3Q8NE01 707 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 GRK7Q8WTQ7 553 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 PHLDA1Q8WV24 401 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 HEXDCQ8WVB3 486 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 HSD17B8Q92506 261 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 PGM2Q96G03 612 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 MSANTD3Q96H12 275 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 FAM71F1Q96KD3 344 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 AK8Q96MA6 479 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 CASD1Q96PB1 797 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 UHRF2Q96PU4 802 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 INTS14Q96SY0 518 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 PSD2Q9BQI7 771 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 JPH2Q9BR39 696 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 TMEM175Q9BSA9 504 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ZMYND12Q9H0C1 365 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 FAM49AQ9H0Q0 323 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 CDH23Q9H251 3354 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 POMKQ9H5K3 350 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 PSTPIP2Q9H939 334 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.4□□□□□ -1.87
HERC1-215ENST00000561436 DONSONQ9NYP3 566 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 VPS18Q9P253 973 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 C19orf25Q9UFG5 118 aaPredicted RBP3.4□□□□□ -1.87
HERC1-215ENST00000561436 CDH7Q9ULB5 785 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 ALPK3Q96L96 1907 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 DOCK7Q96N67 2140 aa3.4□□□□□ -1.87
HERC1-215ENST00000561436 CEP290O15078 2479 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 PIEZO1Q92508 2521 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 LOC101059948A0A1B0GTJ6 334 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 DUXAA6NLW8 204 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 HIDE1A8MVS5 230 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 FAM72CH0Y354 149 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 O00370 1275 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ATP6V0E1O15342 81 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 TGDSO95455 350 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 SP9P0CG40 484 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 PAX1P15863 534 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CA4P22748 312 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 HOXA6P31267 233 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 HOXA9P31269 272 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CSTF2P33240 577 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERC1-215ENST00000561436 CETN2P41208 172 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 WNT5AP41221 380 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 RPL21P46778 160 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 RGS7P49802 495 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 MAZP56270 477 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 MTCP1P56278 107 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 UBASH3AP57075 661 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 YWHAHQ04917 246 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 TNK1Q13470 666 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZRSR1Q15695 479 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 RBBP7Q16576 425 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ITPRIPL2Q3MIP1 535 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 UGT3A2Q3SY77 523 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CEP55Q53EZ4 464 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 TECRLQ5HYJ1 363 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 SLC35D3Q5M8T2 416 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 C1QTNF12Q5T7M4 302 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 C20orf194Q5TEA3 1177 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 FAM72AQ5TYM5 149 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 PLPP4Q5VZY2 271 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms