RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 HEPACAMQ14CZ8 416 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 PCLAFQ15004 111 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 RPS6KA2Q15349 733 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ZXDCQ2QGD7 858 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 ATP6AP1LQ52LC2 224 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ARL13AQ5H913 290 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 SH2D5Q6ZV89 423 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 RPS27LQ71UM5 84 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 PARP9Q8IXQ6 854 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 SAMD14Q8IZD0 417 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 FAM9CQ8IZT9 166 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ACOT4Q8N9L9 421 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 AGAP11Q8TF27 550 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 TANKQ92844 425 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 PPP3R2Q96LZ3 170 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 DGAT2Q96PD7 388 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 PRPF18Q99633 342 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 PELOQ9BRX2 385 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 MECRQ9BV79 373 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 TMEM121BQ9BXQ6 578 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 TGIF2Q9GZN2 237 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 SPNS1Q9H2V7 528 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 C12orf65Q9H3J6 166 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 GSTO2Q9H4Y5 243 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 KLHL31Q9H511 634 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 MLXIPLQ9NP71 852 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 MED4Q9NPJ6 270 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 MIEF1Q9NQG6 463 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 PRDM9Q9NQV7 894 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM1-229ENST00000561242 THAP1Q9NVV9 213 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 CTSFQ9UBX1 484 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ADAM29Q9UKF5 820 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 EIF3LQ9Y262 564 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 MMACHCQ9Y4U1 282 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ASB1Q9Y576 335 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 MRPS18BQ9Y676 258 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 CLCA3PQ9Y6N3 262 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ZNF780BQ9Y6R6 833 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 TRPC5OSA6NMA1 111 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 AGPSO00116 658 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 DYNC1I1O14576 645 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ITGB2P05107 769 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 CTSBP07858 339 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 FAM58BPP0C7Q3 252 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 PCSK2P16519 638 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 BGNP21810 368 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ATP5A1P25705 553 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 PIK3R1P27986 724 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 RPL3P39023 403 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 RPL14P50914 215 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 HSD17B7P56937 341 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 AIMP2Q13155 320 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 ABRAXAS2Q15018 415 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 EXT1Q16394 746 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 COL28A1Q2UY09 1125 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 LETMD1Q6P1Q0 360 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 SCIMPQ6UWF3 145 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 FAM198BQ6UWH4 519 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ZCCHC23Q6ZST2 131 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 NDUFAF7Q7L592 441 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 WDR75Q8IWA0 830 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 KBTBD2Q8IY47 623 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 TMEM132CQ8N3T6 1108 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ZCCHC7Q8N3Z6 543 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 FAM47BQ8NA70 645 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 SUN3Q8TAQ9 357 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 WDR20Q8TBZ3 569 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 DAZLQ92904 295 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 TUBGCP3Q96CW5 907 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ART5Q96L15 291 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 RBCK1Q9BYM8 510 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 RPF2Q9H7B2 306 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 LRTM1Q9HBL6 345 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ZBTB26Q9HCK0 441 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 PNO1Q9NRX1 252 aaKnown RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 COPS7AQ9UBW8 275 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 VTI1BQ9UEU0 232 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 PPT2Q9UMR5 302 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 MAPRE3Q9UPY8 281 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ENTPD4Q9Y227 616 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 RAP2CQ9Y3L5 183 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 UNC13CQ8NB66 2214 aa10.12□□□□□ -0.79
TPM1-229ENST00000561242 ARID1BQ8NFD5 2236 aaPredicted RBP10.12□□□□□ -0.79
TPM1-229ENST00000561242 A6NL46 340 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 TAF4O00268 1085 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 PCDH7O60245 1069 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 CTNSO60931 367 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 RSL1D1O76021 490 aaKnown RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 ONECUT2O95948 504 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 ANXA4P09525 319 aaPredicted RBP10.11□□□□□ -0.79
TPM1-229ENST00000561242 SBK3P0C264 359 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 LINC00032P0C843 101 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 NR2F6P10588 404 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 CREB1P16220 341 aa10.11□□□□□ -0.79
TPM1-229ENST00000561242 EPORP19235 508 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms