RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MST1P26927 711 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 KCNC1P48547 511 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 PIK3CGP48736 1102 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 HSPA7P48741 367 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 KCNK10P57789 538 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 OR4D2P58180 307 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 IRF8Q02556 426 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 RCN2Q14257 317 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 EXT1Q16394 746 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 ACER2Q5QJU3 275 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 QSOX2Q6ZRP7 698 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 MDS2Q8NDY4 140 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 SRFBP1Q8NEF9 429 aaKnown RBP14.97□□□□□ -0.01
LMX1B-204ENST00000561065 C7orf57Q8NEG2 295 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 M1APQ8TC57 530 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 NXNL1Q96CM4 212 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 PTCD3Q96EY7 689 aaKnown RBP14.97□□□□□ -0.01
LMX1B-204ENST00000561065 C5orf34Q96MH7 638 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 SIGLEC12Q96PQ1 595 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 LPAR4Q99677 370 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 VPS11Q9H270 941 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 KCNK13Q9HB14 408 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 NECTIN3Q9NQS3 549 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 ANKRD10Q9NXR5 420 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 STMN3Q9NZ72 180 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 ADGRE2Q9UHX3 823 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 OSGIN2Q9Y236 505 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 CLDN16Q9Y5I7 305 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 TEX15Q9BXT5 2789 aa14.97□□□□□ -0.01
LMX1B-204ENST00000561065 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 K7EPI3 171 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 PSMD12O00232 456 aaPredicted RBP14.96□□□□□ -0.01
LMX1B-204ENST00000561065 PRAMEF2O60811 474 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 GFAPP14136 432 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 COL8A1P27658 744 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 SERPINB1P30740 379 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 HNRNPFP52597 415 aaKnown RBP14.96□□□□□ -0.01
LMX1B-204ENST00000561065 TUBA3CQ13748 450 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 TBCCQ15814 346 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 C4orf17Q53FE4 359 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 XKR6Q5GH73 641 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 TUBA3EQ6PEY2 450 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 TMEM52Q8NDY8 209 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 ELP5Q8TE02 316 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 EXT2Q93063 718 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 GAL3ST3Q96A11 431 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 MS4A6EQ96DS6 147 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 PAFAH2Q99487 392 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 RHBGQ9H310 441 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 CELSR2Q9HCU4 2923 aa14.96□□□□□ -0.01
LMX1B-204ENST00000561065 IQANK1A0A1B0GTG1 560 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 TCRBV16S1A1N1A0A5B0 115 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 SYNDIG1LA6NDD5 238 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 SAGE2PA6NJ88 616 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ERI3O43414 337 aaKnown RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 CLEC3AO75596 197 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 RNH1P13489 461 aaKnown RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ALDH18A1P54886 795 aaKnown RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ACTN3Q08043 901 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 RUNX2Q13950 521 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF468Q5VIY5 522 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 MAMDC2Q7Z304 686 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 LCA5Q86VQ0 697 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ARMC2Q8NEN0 867 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 NFAM1Q8NET5 270 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-204ENST00000561065 CCT6BQ92526 530 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF354BQ96LW1 612 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 PTCHD1Q96NR3 888 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 QRFPRQ96P65 431 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 CENPKQ9BS16 269 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 ROGDIQ9GZN7 287 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 IGSF5Q9NSI5 407 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 TEKT2Q9UIF3 430 aa14.95□□□□□ -0.02
LMX1B-204ENST00000561065 LRIT2A6NDA9 550 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 GABRR3A8MPY1 467 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 LRRTM2O43300 516 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 PRMT3O60678 531 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 SMIM24O75264 130 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 RASAL1O95294 804 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 STSP08842 583 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 CD96P40200 585 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 CASP2P42575 452 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 BTN3A2P78410 334 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 PHEXP78562 749 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 BMPR2Q13873 1038 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 DOC2AQ14183 400 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 MEP1AQ16819 746 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 ADPRMQ3LIE5 342 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF766Q5HY98 468 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 CHSY3Q70JA7 882 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 SCUBE1Q8IWY4 988 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 KCTD4Q8WVF5 259 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 REPS1Q96D71 796 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 WDR34Q96EX3 536 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 SCYL1Q96KG9 808 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 ATOH8Q96SQ7 321 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 CSF3RQ99062 836 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 NPLQ9BXD5 320 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-204ENST00000561065 L2HGDHQ9H9P8 463 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 PPCSQ9HAB8 311 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms