RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 FAM111AQ96PZ2 611 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 FRG2BQ96QU4 278 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 SERINC2Q96SA4 455 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 NPLQ9BXD5 320 aaPredicted RBP14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 ZNF717Q9BY31 904 aaPredicted RBP14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 TRIM4Q9C037 500 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 ING2Q9H160 280 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 MKL2Q9ULH7 1088 aa14.61□□□□□ -0.07
RABGGTA-219ENST00000560871 A0A088AWK7 358 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 MASP2O00187 686 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 PLPP1O14494 284 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 PCDH17O14917 1159 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 ALOX12BO75342 701 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 SH3BGRLO75368 114 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 CDC123O75794 336 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 CEACAM4O75871 244 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 MLYCDO95822 493 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 HEXBP07686 556 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 COX6A1P12074 109 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 NR1D1P20393 614 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 ZNF10P21506 573 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 CASRP41180 1078 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 ETV4P43268 484 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 NEK2P51955 445 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 ARFIP1P53367 373 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 NAGLUP54802 743 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 RRADP55042 308 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 MTTPP55157 894 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 NAA20P61599 178 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 PHEXP78562 749 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 TGM3Q08188 693 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 RUNX2Q13950 521 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 TUBB8Q3ZCM7 444 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 MINDY4Q4G0A6 757 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 LIPMQ5VYY2 423 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 FRMD7Q6ZUT3 714 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 CHSY3Q70JA7 882 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 CROCCP2Q86T23 111 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 C10orf107Q8IVU9 208 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 SRFBP1Q8NEF9 429 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 AGAP11Q8TF27 550 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 C8orf44Q96CB5 159 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 PGM2Q96G03 612 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 FER1L6-AS2Q96M78 137 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 TBCDQ9BTW9 1192 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 IQCGQ9H095 443 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 COPS7BQ9H9Q2 264 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 FBXL4Q9UKA2 621 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 STK38LQ9Y2H1 464 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 TLN1Q9Y490 2541 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 MED13Q9UHV7 2174 aa14.6□□□□□ -0.07
RABGGTA-219ENST00000560871 OR2W5A6NFC9 320 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 SAP18O00422 153 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 PEX12O00623 359 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 UBFD1O14562 309 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 B3GALT2O43825 422 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 C8orf89P0DMQ9 161 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 RNH1P13489 461 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 ACPPP15309 386 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 HIST1H1TP22492 207 aaPredicted RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 JAK1P23458 1154 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 ATP5A1P25705 553 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 TSFMP43897 325 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 PKNOX1P55347 436 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 RAB38P57729 211 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 KCNC4Q03721 635 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 TLE1Q04724 770 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 EEF1A2Q05639 463 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 KLRB1Q12918 225 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 IFT88Q13099 833 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 CUL3Q13618 768 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 TCHHL1Q5QJ38 904 aaPredicted RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 QSOX2Q6ZRP7 698 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 LANCL3Q6ZV70 420 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 GPRIN3Q6ZVF9 776 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 PLPP5Q8NEB5 264 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 CSF3RQ99062 836 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 SORBS1Q9BX66 1292 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 SLC29A3Q9BZD2 475 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 ROGDIQ9GZN7 287 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 EPN3Q9H201 632 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 FARSBQ9NSD9 589 aaKnown RBP14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 DAPP1Q9UN19 280 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
RABGGTA-219ENST00000560871 IGHV1-45A0A0A0MS14 117 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 SEMA3DO95025 777 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 ESRRBO95718 433 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 HPP00738 406 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 PDGFAP04085 211 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 PTX3P26022 381 aaPredicted RBP14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 SSR2P43308 183 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 LIM2P55344 173 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 SOX8P57073 446 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 PCOLCEQ15113 449 aa14.58□□□□□ -0.08
RABGGTA-219ENST00000560871 MFSD4BQ5TF39 518 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms