RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 NTRK1P04629 796 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 LINC00032P0C843 101 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ALOX12P18054 663 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PTX3P26022 381 aaPredicted RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 CERS1P27544 350 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TPP2P29144 1249 aaPredicted RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC5A2P31639 672 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 LSP1P33241 339 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SSR2P43308 183 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TSFMP43897 325 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 RAP1GDS1P52306 607 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ARFIP1P53367 373 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PLA2G16P53816 162 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ARSFP54793 590 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 RAB8AP61006 207 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 RPL38P63173 70 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 GNGT1P63211 74 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 RAE1P78406 368 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 FAM53BQ14153 422 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 HERC3Q15034 1050 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 NDUFA9Q16795 377 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 MUM1Q2TAK8 710 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 DEFB134Q4QY38 66 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC9B1Q4ZJI4 515 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMEM35AQ53FP2 167 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 VWA5B1Q5TIE3 1220 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 C1orf189Q5VU69 101 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 LCN10Q6JVE6 187 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TRIM40Q6P9F5 258 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 FAM198BQ6UWH4 519 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF517Q6ZMY9 492 aaPredicted RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TTLL10Q6ZVT0 673 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ABHD13Q7L211 337 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 TIPARPQ7Z3E1 657 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 WDR75Q8IWA0 830 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ALDH16A1Q8IZ83 802 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 DSELQ8IZU8 1212 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZCCHC7Q8N3Z6 543 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 C1orf52Q8N6N3 182 aaKnown RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR9A4Q8NGU2 314 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 RFWD2Q8NHY2 731 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PROKR1Q8TCW9 393 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 MVB12AQ96EY5 273 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 FAR2Q96K12 515 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PPP1R36Q96LQ0 422 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC46A1Q96NT5 459 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 KCNC2Q96PR1 638 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 NDC1Q9BTX1 674 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ULBP3Q9BZM4 244 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PRDM7Q9NQW5 492 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC22A11Q9NSA0 550 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 SIRT5Q9NXA8 310 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 VPS29Q9UBQ0 182 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 VTI1BQ9UEU0 232 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 MSRB2Q9Y3D2 182 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 NAALAD2Q9Y3Q0 740 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 USH1CQ9Y6N9 552 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 CELSR3Q9NYQ7 3312 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
CTDSPL2-210ENST00000560834 PTPRZ1P23471 2315 aaPredicted RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 MED19A0JLT2 244 aaPredicted RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 TRABD2BA6NFA1 517 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLCO1B7G3V0H7 640 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 H0YIG0 161 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 J3QL48 77 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 SGK494L7N484 410 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 MEN1O00255 615 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 NVLO15381 856 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 RGS14O43566 566 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMPRSS11DO60235 418 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 PCDH7O60245 1069 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 CNOT3O75175 753 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 DNAJB6O75190 326 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 TGDSO95455 350 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 ONECUT2O95948 504 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 VIMP08670 466 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 HBQ1P09105 142 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 ALDOCP09972 364 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 FBLP22087 321 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 HIST1H1TP22492 207 aaPredicted RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 ATP5A1P25705 553 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 TIA1P31483 386 aaKnown RBP eCLIP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR1D4P47884 311 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 EFNA3P52797 238 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 MTTPP55157 894 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 OLR1P78380 273 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 BTN3A2P78410 334 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 SHC2P98077 582 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 MAT1AQ00266 395 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 RUNX2Q13950 521 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 MAP7Q14244 749 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC9A5Q14940 896 aa6.65□□□□□ -1.34
CTDSPL2-210ENST00000560834 IMPG1Q17R60 797 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms