RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM222BQ8WU58 562 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 MAIP1Q8WWC4 291 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 THAP11Q96EK4 314 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 CNPPD1Q9BV87 410 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 RAB17Q9H0T7 212 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.94
TPM1-225ENST00000560679 NECTIN3Q9NQS3 549 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 TMEM184CQ9NVA4 438 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 EDARQ9UNE0 448 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 MED16Q9Y2X0 877 aa9.21□□□□□ -0.94
TPM1-225ENST00000560679 A0A1B0GVC2 190 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 A8MUA0 341 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 GOLGA8KD6RF30 607 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 GOLGA8TH3BQL2 631 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 ACOT7O00154 380 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 CHST10O43529 356 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 GALR3O60755 368 aaPredicted RBP9.2□□□□□ -0.94
TPM1-225ENST00000560679 SYF2O95926 243 aaKnown RBP9.2□□□□□ -0.94
TPM1-225ENST00000560679 GAS8O95995 478 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 FAM153BP0C7A2 387 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 JAK1P23458 1154 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 TACR1P25103 407 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 NMBRP28336 390 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 ECHS1P30084 290 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 FNTAP49354 379 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 CLCN7P51798 805 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PLGLB1Q02325 96 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 HYAL2Q12891 473 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PCBP2Q15366 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM1-225ENST00000560679 CYP1B1Q16678 543 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 FAM153CQ494X1 144 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 RIPPLY2Q5TAB7 128 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 THEMIS2Q5TEJ8 643 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PAOXQ6QHF9 649 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 KIAA0408Q6ZU52 694 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PRUNE1Q86TP1 453 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 TMEM156Q8N614 296 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 TMEM251Q8N6I4 163 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PRELID2Q8N945 189 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 NAXEQ8NCW5 288 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PPHLN1Q8NEY8 458 aaKnown RBP9.2□□□□□ -0.94
TPM1-225ENST00000560679 B3GNT7Q8NFL0 401 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 SLC13A3Q8WWT9 602 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 ASB11Q8WXH4 323 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 PTCHD1Q96NR3 888 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 SARGQ9BW04 601 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 TIMMDC1Q9NPL8 285 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 CCDC177Q9NQR7 707 aaPredicted RBP9.2□□□□□ -0.94
TPM1-225ENST00000560679 SPRR3Q9UBC9 169 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 UTP11Q9Y3A2 253 aaKnown RBP9.2□□□□□ -0.94
TPM1-225ENST00000560679 EML6Q6ZMW3 1958 aa9.2□□□□□ -0.94
TPM1-225ENST00000560679 NCKAP5O14513 1909 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 MPDZO75970 2070 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 FAM171A2A8MVW0 826 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 KDM4EB2RXH2 506 aaPredicted RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 C4orf51C9J302 202 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 INAFM1C9JVW0 142 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 TGFBR3LH3BV60 316 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 GFYI3L273 518 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 AQP7O14520 342 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 WDR1O75083 606 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 MYO1DO94832 1006 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 OR6B1O95007 311 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 ESR1P03372 595 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 F7P08709 466 aaPredicted RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 SLC35G6P0C7Q6 338 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 CDH1P12830 882 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 HRH2P25021 359 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 ASCL1P50553 236 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 SSR4P51571 173 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 CLCN2P51788 898 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 ADARP55265 1226 aaKnown RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 HERC3Q15034 1050 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 SIX1Q15475 284 aaPredicted RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 TRADDQ15628 312 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 FBXL19-AS1Q494R0 122 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 DEFB134Q4QY38 66 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 XKR6Q5GH73 641 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 DUPD1Q68J44 220 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 CAPN13Q6MZZ7 669 aaPredicted RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 CES3Q6UWW8 571 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 LRIG3Q6UXM1 1119 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 MBOAT1Q6ZNC8 495 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 SLC22A16Q86VW1 577 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 VWA5B2Q8N398 1253 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 FAM109AQ8N4B1 249 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 MFSD9Q8NBP5 474 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 ATG4AQ8WYN0 398 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 RNASE6Q93091 150 aaKnown RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 MAGOHBQ96A72 148 aaKnown RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 ERP44Q9BS26 406 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 DPH5Q9H2P9 285 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 LIN28AQ9H9Z2 209 aaKnown RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 NEUROD4Q9HD90 331 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 PSD3Q9NYI0 1048 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 B4GALT7Q9UBV7 327 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 FBXW2Q9UKT8 454 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms