RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 KHDRBS2Q5VWX1 349 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 DUS1LQ6P1R4 473 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 TRIM40Q6P9F5 258 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 ANKRD53Q8N9V6 530 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 OR13F1Q8NGS4 319 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 EPYCQ99645 322 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 MS4A8Q9BY19 250 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 SLC6A16Q9GZN6 736 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 RIBC2Q9H4K1 309 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 FANCEQ9HB96 536 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 THUMPD1Q9NXG2 353 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 TAAR2Q9P1P5 351 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 ACSL6Q9UKU0 697 aa13.82□□□□□ -0.2
RABGGTA-212ENST00000559974 A0A1W2PPV9 198 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 K7EQS6 105 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SLC1A7O00341 560 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 JRKO75564 520 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 C9P02748 559 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 AGXTP21549 392 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 GSTM2P28161 218 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SERPINB1P30740 379 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 CASP9P55211 416 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 CYP4F2P78329 520 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 IL1RL1Q01638 556 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 DMPKQ09013 629 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 RAPSNQ13702 412 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SCARB2Q14108 478 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 ELOAQ14241 798 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 FGL2Q14314 439 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 XAF1Q6GPH4 301 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SPARTQ8N0X7 666 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 ZNF717Q9BY31 904 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 TMEM38AQ9H6F2 299 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SLC2A4RGQ9NR83 387 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 PHPT1Q9NRX4 125 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 C1GALT1Q9NS00 363 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 KIF17Q9P2E2 1029 aa13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 ZFR2Q9UPR6 939 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-212ENST00000559974 SNRNP200O75643 2136 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 VPS13AQ96RL7 3174 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 H3BMQ9 156 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SEC14L2O76054 403 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 KRT75O95678 551 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PAK4O96013 591 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 CCDC159P0C7I6 412 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 ACP5P13686 325 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PSMB5P28074 263 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SOAT1P35610 550 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PRIM2P49643 509 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 NUP107P57740 925 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 IL5RAQ01344 420 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 GRSF1Q12849 480 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SLC5A12Q1EHB4 618 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 ZNF776Q68DI1 518 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 RNF130Q86XS8 419 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 MMP21Q8N119 569 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 GJD3Q8N144 294 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 RAB42Q8N4Z0 105 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 OR5AK3PQ8NH89 298 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SGCDQ92629 289 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 ZNF566Q969W8 418 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 COG8Q96MW5 612 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PITHD1Q9GZP4 211 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 NT5DC2Q9H857 520 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 KRT84Q9NSB2 600 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 EXD2Q9NVH0 621 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 ICKQ9UPZ9 632 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 WDR37Q9Y2I8 494 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 WBP11Q9Y2W2 641 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 MAP4K5Q9Y4K4 846 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 HSPE1-MOB4S4R3N1 261 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 H7BY64 318 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 HTR1AP08908 422 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 CYP4B1P13584 511 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 DDCP20711 480 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 BSGP35613 385 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 MAPK12P53778 367 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 RPS21P63220 83 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 CDK5R2Q13319 367 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SIM2Q14190 667 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 FAHD1Q6P587 224 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 CCDC80Q76M96 950 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PAGE2Q7Z2X7 111 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 ATG16L2Q8NAA4 619 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 NFKBIDQ8NI38 313 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 SPPL2AQ8TCT8 520 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 DNASE1L2Q92874 299 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 KLK6Q92876 244 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 MAGED4Q96JG8 741 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 C12orf66Q96MD2 445 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 PRAP1Q96NZ9 151 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 FERD3LQ96RJ6 166 aa13.8□□□□□ -0.2
RABGGTA-212ENST00000559974 TIMM29Q9BSF4 260 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms