RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 HAS2Q92819 552 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 ISL2Q96A47 359 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 SCYL1Q96KG9 808 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF354BQ96LW1 612 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 QRFPRQ96P65 431 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 F2RL3Q96RI0 385 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 SERINC2Q96SA4 455 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 NPLQ9BXD5 320 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-214ENST00000559433 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 NTNG1Q9Y2I2 539 aa11.82□□□□□ -0.52
LRRC28-214ENST00000559433 IGKV3D-11A0A0A0MRZ8 115 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 LRRC14BA6NHZ5 514 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TRIM49D1C9J1S8 452 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ABHD2P08910 425 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 SERPINB1P30740 379 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 MAGEA12P43365 314 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TNFSF10P50591 281 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 MTTPP55157 894 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 RAB38P57729 211 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 SLC26A5P58743 744 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TAS2R50P59544 299 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 DDX39BQ13838 428 aaKnown RBP11.81□□□□□ -0.52
LRRC28-214ENST00000559433 E2F2Q14209 437 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 FCRLBQ6BAA4 426 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 GRHL2Q6ISB3 625 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ABHD17CQ6PCB6 329 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TRMT10CQ7L0Y3 403 aaKnown RBP11.81□□□□□ -0.52
LRRC28-214ENST00000559433 LAS2Q8IYD9 372 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 BCORP1Q8N888 145 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 FAM47BQ8NA70 645 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ADAMTS18Q8TE60 1221 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF473Q8WTR7 871 aaKnown RBP11.81□□□□□ -0.52
LRRC28-214ENST00000559433 KCNC2Q96PR1 638 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 RNF32Q9H0A6 362 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 MMP25Q9NPA2 562 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 NECTIN3Q9NQS3 549 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 ZNF358Q9NW07 568 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 MRPS33Q9Y291 106 aaKnown RBP11.81□□□□□ -0.52
LRRC28-214ENST00000559433 MMACHCQ9Y4U1 282 aa11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TNPO3Q9Y5L0 923 aaKnown RBP11.81□□□□□ -0.52
LRRC28-214ENST00000559433 TCRBV16S1A1N1A0A5B0 115 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 BLACEA4D250 179 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 OR5H15A6NDH6 313 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SAGE2PA6NJ88 616 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CLDN4O14493 209 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 KLK8O60259 260 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SH3BGRLO75368 114 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SIX3O95343 332 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CBX6O95503 412 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 RBP1P09455 135 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 ARL1P40616 181 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 LIM2P55344 173 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SRSF1Q07955 248 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 PCDH1Q08174 1060 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SLC13A2Q13183 592 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 GTF2H2Q13888 395 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 RCN2Q14257 317 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 PCBP2Q15366 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 MEP1AQ16819 746 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 TSNAXIP1Q2TAA8 658 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 TMEM35AQ53FP2 167 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 ACER2Q5QJU3 275 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 H3F3CQ6NXT2 135 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 GTF2H2CQ6P1K8 395 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CLEC18BQ6UXF7 455 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 GOLGA7Q7Z5G4 137 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CRLF3Q8IUI8 442 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 BEST3Q8N1M1 668 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SLC5A8Q8N695 610 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 PTGR2Q8N8N7 351 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SRFBP1Q8NEF9 429 aaKnown RBP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 OR7G3Q8NG95 312 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 GRHL3Q8TE85 626 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SSC4DQ8WTU2 575 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 CMTM7Q96FZ5 175 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 MS4A8Q9BY19 250 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 ROGDIQ9GZN7 287 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 PRTFDC1Q9NRG1 225 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 XPR1Q9UBH6 696 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 TMCO1Q9UM00 188 aa11.8□□□□□ -0.52
LRRC28-214ENST00000559433 USP9XQ93008 2570 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-214ENST00000559433 SVILO95425 2214 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 A8MUA0 341 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 SAP18O00422 153 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 E2F3O00716 465 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 RIPK2O43353 540 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 SMIM24O75264 130 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 DDAH2O95865 285 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 TGFB1P01137 390 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
LRRC28-214ENST00000559433 FAM153BP0C7A2 387 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 COL6A2P12110 1019 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 GP1BBP13224 206 aa11.79□□□□□ -0.52
LRRC28-214ENST00000559433 EEF1DP29692 281 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms