RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NECTIN3Q9NQS3 549 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 PLLPQ9Y342 182 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 TSC22D4Q9Y3Q8 395 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 LOC102723996A0A087X1L8 192 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 B3GALT2O43825 422 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 EEDO75530 441 aaKnown RBP17.6■□□□□ 0.41
CASC4-209ENST00000559222 OTCP00480 354 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 TUBBP07437 444 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 CPA3P15088 417 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 SERPINB1P30740 379 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 NAGLUP54802 743 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 RRADP55042 308 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 MTTPP55157 894 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 LIM2P55344 173 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 NFATC3Q12968 1075 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 FRG2Q64ET8 278 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 PTRH1Q86Y79 214 aaKnown RBP17.6■□□□□ 0.41
CASC4-209ENST00000559222 CNPY4Q8N129 248 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 ACOT4Q8N9L9 421 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 TCP10LQ8TDR4 215 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 FER1L6-AS2Q96M78 137 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 KCNC2Q96PR1 638 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 FRG2BQ96QU4 278 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 SERINC2Q96SA4 455 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 ZNF382Q96SR6 550 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 MAPKAP1Q9BPZ7 522 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 WDR77Q9BQA1 342 aaPredicted RBP17.6■□□□□ 0.41
CASC4-209ENST00000559222 SLC25A23Q9BV35 468 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 SHCBP1LQ9BZQ2 653 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 SLC25A18Q9H1K4 315 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 COPS7BQ9H9Q2 264 aaPredicted RBP17.6■□□□□ 0.41
CASC4-209ENST00000559222 KCMF1Q9P0J7 381 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 TRPS1Q9UHF7 1281 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 CLDN16Q9Y5I7 305 aa17.6■□□□□ 0.41
CASC4-209ENST00000559222 CPAMD8Q8IZJ3 1885 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 MYOCOSA0A1B0GUC4 107 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 A0A1W2PQ72 361 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 CCDC151A5D8V7 595 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 MKRN2OSH3BPM6 223 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 TYROBPO43914 113 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 PRKRAO75569 313 aaKnown RBP17.59■□□□□ 0.41
CASC4-209ENST00000559222 SEC24DO94855 1032 aaPredicted RBP17.59■□□□□ 0.41
CASC4-209ENST00000559222 HPP00738 406 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 PDYNP01213 254 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 CHN1P15882 459 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 HIST1H1TP22492 207 aaPredicted RBP17.59■□□□□ 0.41
CASC4-209ENST00000559222 SSR2P43308 183 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 FOXA1P55317 472 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 RAB38P57729 211 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 ABRAXAS2Q15018 415 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 TMEM35AQ53FP2 167 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 TTC19Q6DKK2 380 aaPredicted RBP17.59■□□□□ 0.41
CASC4-209ENST00000559222 GPRIN3Q6ZVF9 776 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 GALNT16Q8N428 558 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 RDH11Q8TC12 318 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 AGAP11Q8TF27 550 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 ZNF700Q9H0M5 742 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 ZBTB20Q9HC78 741 aaPredicted RBP17.59■□□□□ 0.41
CASC4-209ENST00000559222 MLXIPLQ9NP71 852 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 OXSMQ9NWU1 459 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 TUBD1Q9UJT1 453 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 DAPP1Q9UN19 280 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 TIMM22Q9Y584 194 aa17.59■□□□□ 0.41
CASC4-209ENST00000559222 IGKV3D-11A0A0A0MRZ8 115 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 NSG1A0A0A6YYJ2 146 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 CYR61O00622 381 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 RGS16O15492 202 aaPredicted RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 TMPRSS11DO60235 418 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 SCELO95171 688 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 GBAP04062 536 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 ITGA3P26006 1051 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 PPP2R1BP30154 601 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 ALDH3A1P30838 453 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 BSGP35613 385 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 RAP1GDS1P52306 607 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 HNRNPH2P55795 449 aaKnown RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 DNAJB13P59910 316 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 SKP1P63208 163 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 LCP2Q13094 533 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 LACTB2Q53H82 288 aaPredicted RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 TNFAIP8L3Q5GJ75 292 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 OR4C11Q6IEV9 310 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 NIPAL1Q6NVV3 410 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 FRMD7Q6ZUT3 714 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 CHSY3Q70JA7 882 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 CPEB2Q7Z5Q1 589 aaKnown RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 CLNKQ7Z7G1 428 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 EXOC3L1Q86VI1 746 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 CLEC1AQ8NC01 280 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 PLPP5Q8NEB5 264 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 NACC2Q96BF6 587 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 REPS1Q96D71 796 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 TBCDQ9BTW9 1192 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 GATA5Q9BWX5 397 aaPredicted RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 NPLQ9BXD5 320 aaPredicted RBP17.58■□□□□ 0.4
CASC4-209ENST00000559222 CENPHQ9H3R5 247 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 ATP13A2Q9NQ11 1180 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 GPR83Q9NYM4 423 aa17.58■□□□□ 0.4
CASC4-209ENST00000559222 ADGRE2Q9UHX3 823 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms