RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MTTPP55157 894 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 LIM2P55344 173 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 STXBP1P61764 594 aaKnown RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 BTG2P78543 158 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 IFT88Q13099 833 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 STX3Q13277 289 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 HERC3Q15034 1050 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 NDUFA9Q16795 377 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 ST3GAL2Q16842 350 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 TMEM35AQ53FP2 167 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 XKR7Q5GH72 579 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 TTC19Q6DKK2 380 aaPredicted RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 MRM1Q6IN84 353 aaKnown RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 TRIM40Q6P9F5 258 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 LANCL3Q6ZV70 420 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 ABHD13Q7L211 337 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 COMMD6Q7Z4G1 85 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 TRIM46Q7Z4K8 759 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 METTL4Q8N3J2 472 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 C1orf52Q8N6N3 182 aaKnown RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 FAM47BQ8NA70 645 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 CHTF18Q8WVB6 975 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 TWIST2Q8WVJ9 160 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 ZNF75CPQ92670 426 aaPredicted RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 TSLPQ969D9 159 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 REPS1Q96D71 796 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 SLC45A3Q96JT2 553 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 CCNL2Q96S94 520 aaPredicted RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 SLCO1B3Q9NPD5 702 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 TEX10Q9NXF1 929 aaPredicted RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 PSD3Q9NYI0 1048 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 NKIRAS1Q9NYS0 192 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 SNX6Q9UNH7 406 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 SLC12A4Q9UP95 1085 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 FARSAQ9Y285 508 aaKnown RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 STK38LQ9Y2H1 464 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 PTRH2Q9Y3E5 179 aaKnown RBP10.28□□□□□ -0.76
TPM1-217ENST00000559108 ASB4Q9Y574 426 aa10.28□□□□□ -0.76
TPM1-217ENST00000559108 MGAQ8IWI9 3026 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 MYOCOSA0A1B0GUC4 107 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 A0A1W2PR48 441 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 C9J4A7 227 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 CYR61O00622 381 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ZNF195O14628 629 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ULK1O75385 1050 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SKAP2O75563 359 aaPredicted RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 CREG1O75629 220 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 HSPA4LO95757 839 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 KRT6AP02538 564 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 KRT6BP04259 564 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 LINC00032P0C843 101 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 PRKAR1AP10644 381 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 PPP2R1BP30154 601 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SERPINB5P36952 375 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SSR2P43308 183 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 KRT6CP48668 564 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 NAA20P61599 178 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 RHAGQ02094 409 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 BTKQ06187 659 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ASPHQ12797 758 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 CSTF3Q12996 717 aaKnown RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 KIAA0040Q15053 153 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 PRSS53Q2L4Q9 553 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 C18orf63Q68DL7 685 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 OR4C11Q6IEV9 310 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 C19orf48Q6RUI8 117 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ZCCHC7Q8N3Z6 543 aaKnown RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 OR2Y1Q8NGV0 311 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 RGMAQ96B86 450 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 C8orf44Q96CB5 159 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 KCNC2Q96PR1 638 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SERINC2Q96SA4 455 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 SERPINI1Q99574 410 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 TBCDQ9BTW9 1192 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 EBPLQ9BY08 206 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 TGIF2Q9GZN2 237 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 VN1R1Q9GZP7 353 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 DDX31Q9H8H2 851 aaKnown RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 MANSC1Q9H8J5 431 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 WDR54Q9H977 334 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 BRF2Q9HAW0 419 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ZNF282Q9UDV7 671 aaPredicted RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 MARCOQ9UEW3 520 aaPredicted RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 ADGRE2Q9UHX3 823 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 DAPP1Q9UN19 280 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 CDC14AQ9UNH5 594 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
TPM1-217ENST00000559108 DLGAP4Q9Y2H0 992 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 ATG4BQ9Y4P1 393 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 HS3ST3B1Q9Y662 390 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.77
TPM1-217ENST00000559108 TNRC6AQ8NDV7 1962 aaKnown RBP10.26□□□□□ -0.77
TPM1-217ENST00000559108 IGKV3D-11A0A0A0MRZ8 115 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 IGHV3-20A0A0C4DH32 117 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 ATP6AP2A0A1C7CYW4 349 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 IDSB3KWA1 339 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms