RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 UBAP1Q9NZ09 502 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 CCDC167Q9P0B6 97 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 PLAGL1Q9UM63 463 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 TDRKHQ9Y2W6 561 aaKnown RBP9.83□□□□□ -0.84
TPM1-212ENST00000558347 PCDHGA6Q9Y5G7 932 aa9.83□□□□□ -0.84
TPM1-212ENST00000558347 ARHGAP10A1A4S6 786 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PIPSLA2A3N6 862 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PRORSD1PA6NEY8 169 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TMEM150CB9EJG8 249 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CPNE3O75131 537 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 TFAP2AP05549 437 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 BMP2P12643 396 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 IDO1P14902 403 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 UGT2B7P16662 529 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 LBPP18428 481 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PEBP1P30086 187 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 SHMT2P34897 504 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 NR1H2P55055 460 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 AP1S2P56377 157 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 MYBPC1Q00872 1141 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 MC1RQ01726 317 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 ERV3-1Q14264 604 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PFKFB4Q16877 469 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CRTC2Q53ET0 693 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 C6orf10Q5SRN2 563 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 METTL2BQ6P1Q9 378 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 TTC23LQ6PF05 361 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SPESP1Q6UW49 350 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 UBE2R2Q712K3 238 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 DHFR2Q86XF0 187 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 RNF148Q8N7C7 305 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 LMNTD1Q8N9Z9 388 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 OR1L3Q8NH93 324 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TRPC4APQ8TEL6 797 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 UBTD2Q8WUN7 234 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TWIST2Q8WVJ9 160 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 OR2A14Q96R47 310 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CCT7Q99832 543 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TWSG1Q9GZX9 223 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SLC25A18Q9H1K4 315 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 AKTIPQ9H8T0 292 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PARVBQ9HBI1 364 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CIDEBQ9UHD4 219 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 POLG2Q9UHN1 485 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PDE10AQ9Y233 779 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FIS1Q9Y3D6 152 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SPTBP11277 2137 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SNRNP200O75643 2136 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 PDLIM1O00151 329 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CLGNO14967 610 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 HNRNPRO43390 633 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 HCRTR1O43613 425 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CREG1O75629 220 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CATP04040 527 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 S100BP04271 92 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 RPS17P08708 135 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 CHRM5P08912 532 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 ALDOCP09972 364 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 MSL3P1P0C860 447 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 GFAPP14136 432 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CYP2A7P20853 494 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 MSX2P35548 267 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 RPS18P62269 152 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 LCP2Q13094 533 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 KCNAB2Q13303 367 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 GRB7Q14451 532 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 ZIC1Q15915 447 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PHKG1Q16816 387 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 INTS11Q5TA45 600 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 SULT1C3Q6IMI6 304 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 LCN10Q6JVE6 187 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 LCN8Q6JVE9 175 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PPP4R4Q6NUP7 873 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 UNC5DQ6UXZ4 953 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 B3GNT6Q6ZMB0 384 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FRA10AC1Q70Z53 315 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SATL1Q86VE3 508 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CARM1Q86X55 608 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FUNDC1Q8IVP5 155 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TCAIMQ8N3R3 496 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 OR8K5Q8NH50 307 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 MCOLN3Q8TDD5 553 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 EXT2Q93063 718 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SLCO4A1Q96BD0 722 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 CNBD2Q96M20 576 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FOPNLQ96NB1 174 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 MENTQ9BUN1 341 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TRIM54Q9BYV2 358 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 RBM38Q9H0Z9 239 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 ADNPQ9H2P0 1102 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 ACTL8Q9H568 366 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FANCEQ9HB96 536 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 FAM60AQ9NP50 221 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 SDR39U1Q9NRG7 319 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 CCM2LQ9NUG4 571 aaPredicted RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 CD274Q9NZQ7 290 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 KCND3Q9UK17 655 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 PTBP2Q9UKA9 531 aaKnown RBP9.82□□□□□ -0.84
TPM1-212ENST00000558347 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 TNPO3Q9Y5L0 923 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms