RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 GRHL3Q8TE85 626 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF473Q8WTR7 871 aaKnown RBP8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 CCT6BQ92526 530 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 ISL2Q96A47 359 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 PTCHD1Q96NR3 888 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 PSMG3-AS1Q96PY0 264 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 LPAR4Q99677 370 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 EFCAB11Q9BUY7 163 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 NPLQ9BXD5 320 aaPredicted RBP8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 REXO4Q9GZR2 422 aaKnown RBP8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 RNF32Q9H0A6 362 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 NECTIN3Q9NQS3 549 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 STMN3Q9NZ72 180 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 CLDN16Q9Y5I7 305 aa8.24□□□□□ -1.09
SNRPA1-206ENST00000558059 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 CACNA1DQ01668 2161 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TRAV17A0A0B4J275 112 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TCRBV16S1A1N1A0A5B0 115 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 LRRC14BA6NHZ5 514 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 SYCE1LA8MT33 242 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PSMD12O00232 456 aaPredicted RBP8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 E2F3O00716 465 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 KLK8O60259 260 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 MAN1A2O60476 641 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 SEMA7AO75326 666 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 MAOAP21397 527 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TYK2P29597 1187 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 SERPINB8P50452 374 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 HNRNPFP52597 415 aaKnown RBP8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PLA2G16P53816 162 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF33BQ06732 778 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 SETDB1Q15047 1291 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ACAP2Q15057 778 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PFKFB4Q16877 469 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PAGE2BQ5JRK9 111 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ACER2Q5QJU3 275 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 FHL5Q5TD97 284 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF324BQ6AW86 544 aaPredicted RBP8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 CRLF3Q8IUI8 442 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 SCUBE1Q8IWY4 988 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 LAS2Q8IYD9 372 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ST6GALNAC3Q8NDV1 305 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 NFAM1Q8NET5 270 aaPredicted RBP8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ELP5Q8TE02 316 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 FAR1Q8WVX9 515 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 FAR2Q96K12 515 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF354BQ96LW1 612 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TAAR6Q96RI8 345 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 MS4A8Q9BY19 250 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 KCNK13Q9HB14 408 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 AGPAT4Q9NRZ5 378 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF358Q9NW07 568 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 OPTCQ9UBM4 332 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 TEKT2Q9UIF3 430 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 MMACHCQ9Y4U1 282 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 CRYBG3Q68DQ2 2970 aa8.23□□□□□ -1.09
SNRPA1-206ENST00000558059 DNAJC13O75165 2243 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 BLACEA4D250 179 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 OR5H15A6NDH6 313 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ANKUB1A6NFN9 424 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 SAGE2PA6NJ88 616 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 A8MUA0 341 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 TGFBR3LH3BV60 316 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 CYR61O00622 381 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ST8SIA5O15466 376 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 B3GALT2O43825 422 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 PRAMEF2O60811 474 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 UQCRHP07919 91 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 INHBAP08476 426 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 RNF224P0DH78 156 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 EPB42P16452 691 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 CERS1P27544 350 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 HPDP32754 393 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 MSH2P43246 934 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 SERPINB9P50453 376 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ST13P50502 369 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ALDH18A1P54886 795 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 MTTPP55157 894 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 LIM2P55344 173 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 RAB38P57729 211 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 PCBP2Q15366 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 HIST2H2ACQ16777 129 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 TECRLQ5HYJ1 363 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 HIST2H2AA3Q6FI13 130 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 GRHL2Q6ISB3 625 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 MED27Q6P2C8 311 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 TRIM40Q6P9F5 258 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF793Q6ZN11 406 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 BEST3Q8N1M1 668 aa8.22□□□□□ -1.09
SNRPA1-206ENST00000558059 KIF2BQ8N4N8 673 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms