RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CAMKMTQ7Z624 323 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ARPINQ7Z6K5 226 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TAF8Q7Z7C8 310 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TRIM73Q86UV7 250 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 PAQR7Q86WK9 346 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 DHFR2Q86XF0 187 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CALHM3Q86XJ0 350 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 PTRH1Q86Y79 214 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 CLECL1Q8IZS7 167 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 NAGSQ8N159 534 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CAMKK1Q8N5S9 505 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MFSD2AQ8NA29 543 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CADM4Q8NFZ8 388 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MAFAQ8NHW3 353 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 CDC26Q8NHZ8 85 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 SLC37A2Q8TED4 501 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 NELL1Q92832 810 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ZUFSPQ96AP4 578 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 COQ8BQ96D53 544 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CXorf40BQ96DE9 158 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 DUS3LQ96G46 650 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 AURKBQ96GD4 344 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 ITCHQ96J02 903 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ZNF583Q96ND8 569 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MACROD1Q9BQ69 325 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TACO1Q9BSH4 297 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 DPH7Q9BTV6 452 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 LRRC61Q9BV99 259 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 SARGQ9BW04 601 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 GSDMCQ9BYG8 508 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 PITHD1Q9GZP4 211 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 KLHL31Q9H511 634 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 PIF1Q9H611 641 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 REEP4Q9H6H4 257 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 AASDHPPTQ9NRN7 309 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TMEM184CQ9NVA4 438 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 NMRK1Q9NWW6 199 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CPNE7Q9UBL6 633 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MCM8Q9UJA3 840 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ANGPTL2Q9UKU9 493 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 DNAH14Q0VDD8 3507 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 GNG14A0A1W2PPG7 69 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TCRBV5S2A0A599 114 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 OR6C74A6NCV1 312 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 LRIT2A6NDA9 550 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 KIAA1324LA8MWY0 1029 aaPredicted RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 ISM1B1AKI9 464 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 C4orf51C9J302 202 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TLR4O00206 839 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TMPRSS11DO60235 418 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 NDUFS2O75306 463 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CLEC3AO75596 197 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TIAF1O95411 115 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PDGFBP01127 241 aaPredicted RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 VIPP01282 170 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CSF2P04141 144 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 POLR2CP19387 275 aaPredicted RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 CD38P28907 300 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CMPK1P30085 196 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 SERPINB1P30740 379 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 HPCAL1P37235 193 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 VHLP40337 213 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 GRIA3P42263 894 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CXCL12P48061 93 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 LSSP48449 732 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TRPC1P48995 793 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 TAS2R50P59544 299 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PHEXP78562 749 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 RHDQ02161 417 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 RPL6Q02878 288 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 CYP4F3Q08477 520 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 ZNF763Q0D2J5 394 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 C2orf80Q0P641 193 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 BNIP2Q12982 314 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 SLC14A1Q13336 389 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PDE7AQ13946 482 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 GPR18Q14330 331 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 DUOXA1Q1HG43 343 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 DPY19L1Q2PZI1 675 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CPTPQ5TA50 214 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CWF19L1Q69YN2 538 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 ZFP1Q6P2D0 407 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 FBXO42Q6P3S6 717 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 GPR155Q7Z3F1 870 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 ADCK2Q7Z695 626 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 GPR180Q86V85 440 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PARGQ86W56 976 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 IFNEQ86WN2 208 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 DCP2Q8IU60 420 aaKnown RBP7.02□□□□□ -1.29
SPG11-204ENST00000557866 SPPL2CQ8IUH8 684 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 ADGRG5Q8IZF4 528 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 PQLC1Q8N2U9 271 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 MFSD9Q8NBP5 474 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 OR10A6Q8NH74 314 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 CANT1Q8WVQ1 401 aa7.02□□□□□ -1.29
SPG11-204ENST00000557866 UCN3Q969E3 161 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms